DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and Gdf2

DIOPT Version :10

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_001099566.1 Gene:Gdf2 / 290921 RGDID:1586196 Length:430 Species:Rattus norvegicus


Alignment Length:462 Identity:107/462 - (23%)
Similarity:168/462 - (36%) Gaps:142/462 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 REKAKVD---SIESIKMHILMRLNLKKLPNITKP-ISVPQNIIDNFYRDYNASSKTTVWNRMESI 259
            ||:...|   .:|::|:..|..|||..:|:..|. ...||.:||.:.|.....|.|...|.:.| 
  Rat    47 REEGVFDLKMFLENMKVDFLRSLNLSGIPSQDKTRAEPPQYMIDLYNRYTTDKSSTPASNIVRS- 110

  Fly   260 DESHLSINDTYGDHIMTDF-FDESSSSQMQGDDANTVNEFLIDLNKN-QAKKSDIPINTNDEEYE 322
                .|:.|........|| |.:.            :..|.|.:.:: |..::::.:      |.
  Rat   111 ----FSVEDAISTAATEDFPFQKH------------ILIFNISIPRHEQITRAELRL------YV 153

  Fly   323 SILSHISSIYIFPEEIQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLR-----GWDWISAHQP 382
            |..:|:.|         .|......|......:|.::...|.....|..:     ||:.:     
  Rat   154 SCQNHVDS---------THGLEGNMVVYDVLDVDETWDSASGTKTFLVSQDIQDEGWETL----- 204

  Fly   383 GLLEEIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRH---------SIPSG---LGQWVA- 434
                        ::...:.|.:|..:||:.| |:::...||         |:|.|   |..:|. 
  Rat   205 ------------EVSSAVKRWVRADSTTNKN-KLEVTVQRHREGCSTLDISVPPGSQNLPFFVVF 256

  Fly   435 ------------VDLKSLLGNLGSNMTQE-ILIKGAETWMKSLVVTTDNTSKNPLTVHIEIGSQK 486
                        ::||.::|:     .|| :|:|               ||||   .:.|.|..:
  Rat   257 SNDRSNGTKETRLELKEMIGH-----EQETVLVK---------------TSKN---AYQEAGESR 298

  Fly   487 KH---------------RRKRSVYMDCTENDHDMRCCRYPLKVNFTSFGW-HFVVAPTSFDAYFC 535
            :.               |||||.   ...:.|   |.:..|:|||...|| .:::||..:|||.|
  Rat   299 EEEERIDGYTAVGPLLARRKRST---GAASSH---CQKTSLRVNFEDIGWDSWIIAPKEYDAYEC 357

  Fly   536 SGDCKVGYLEQYPHT---------HLAALTTSATPCCSPTKMSSLSLLYFDDNHNLVLSV-IPNM 590
            .|.|.....:....|         ||...|.....||.|||:|.:|:||.||.....|.. ...|
  Rat   358 KGGCFFPLADDVTPTKHAIVQTLVHLKFPTKVGKACCVPTKLSPISILYKDDMGVPTLKYHYEGM 422

  Fly   591 SVEGCSC 597
            ||..|.|
  Rat   423 SVAECGC 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 35/101 (35%)
Gdf2NP_001099566.1 TGFb_propeptide 69..215 CDD:480997 34/194 (18%)
TGF_beta_BMP9 326..430 CDD:381670 37/107 (35%)

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