DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and GDF9

DIOPT Version :10

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_005251.1 Gene:GDF9 / 2661 HGNCID:4224 Length:454 Species:Homo sapiens


Alignment Length:464 Identity:84/464 - (18%)
Similarity:155/464 - (33%) Gaps:176/464 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 WNRMESIDESHLSINDTYGDHIMTDFF-----DESSSSQMQGDDANTVNEFLIDLNKNQAKKSDI 312
            |:.::.|||     .|..|  ::...|     ....|.::|.|  :....::..|.|..|.|..|
Human    47 WSLLQHIDE-----RDRAG--LLPALFKVLSVGRGGSPRLQPD--SRALHYMKKLYKTYATKEGI 102

  Fly   313 PINTNDEEYESILSHI-SSIYIFPEEIQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLRGWDW 376
            |        :|..||: :::.:|    .|..||.:...                         |.
Human   103 P--------KSNRSHLYNTVRLF----TPCTRHKQAPG-------------------------DQ 130

  Fly   377 ISAHQPGLLEEIKKQPRKDIVVTIHRAIR------VANTTSFNPKVK------------------ 417
            ::    |:|..::.....|.:.|:...::      :.|:.||:..||                  
Human   131 VT----GILPSVELLFNLDRITTVEHLLKSVLLYNINNSVSFSSAVKCVCNLMIKEPKSSSRTLG 191

  Fly   418 ----------MFEF--RHSIPSGLGQWVAVDLKSLLGNLGSNMTQEILIKGAETWMK-------- 462
                      .|||  :|       :|:.:|:.|||..|.::..:.|.:....|.||        
Human   192 RAPYSFTFNSQFEFGKKH-------KWIQIDVTSLLQPLVASNKRSIHMSINFTCMKDQLEHPSA 249

  Fly   463 ------------SLVVTTDNTS----------------------KNPLTVH------IEIGSQKK 487
                        ||::..::||                      :..|:.:      .|.|....
Human   250 QNGLFNMTLVSPSLILYLNDTSAQAYHSWYSLHYKRRPSQGPDQERSLSAYPVGEEAAEDGRSSH 314

  Fly   488 HRRKRSVYMDCTENDHDM-------------------RCCRYPLKVNFTSFGW-HFVVAPTSFDA 532
            ||.:|......:|....:                   .|..:..:::|:...| :::|||..::.
Human   315 HRHRRGQETVSSELKKPLGPASFNLSEYFRQFLLPQNECELHDFRLSFSQLKWDNWIVAPHRYNP 379

  Fly   533 YFCSGDC--KVGYLEQYP-HTHLAAL------TTSATPCCSPTKMSSLSLLYFDDNHNLVLSVIP 588
            .:|.|||  .||:....| ||.:..:      ::...|.|.|.|.|.||:|..:.:.::......
Human   380 RYCKGDCPRAVGHRYGSPVHTMVQNIIYEKLDSSVPRPSCVPAKYSPLSVLTIEPDGSIAYKEYE 444

  Fly   589 NMSVEGCSC 597
            :|....|:|
Human   445 DMIATKCTC 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 25/100 (25%)
GDF9NP_005251.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..330 6/26 (23%)
TGF_beta_GDF9 349..454 CDD:381673 26/105 (25%)

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