DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and Bmp4

DIOPT Version :10

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:XP_063130065.1 Gene:Bmp4 / 25296 RGDID:2213 Length:455 Species:Rattus norvegicus


Alignment Length:446 Identity:103/446 - (23%)
Similarity:176/446 - (39%) Gaps:119/446 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 KAKVDSIE-------SIKMHILMR---------LNLKKLPNITKPISVPQNIIDNFYRDYNASSK 249
            |.||..|:       |.:.|.|:|         ..|::.|..:|...:|..:.|.:         
  Rat    79 KKKVAEIQGHAGGRRSGQSHELLRDFEATLLQMFGLRRRPQPSKSAVIPDYMRDLY--------- 134

  Fly   250 TTVWNRMESIDESHLSINDTYGDHIMTDFFDESSSSQMQG--------DDANTVNEFLIDLNKNQ 306
                 |::|.:|                  :|...||..|        ..||||..|     .::
  Rat   135 -----RLQSGEE------------------EEEEQSQGTGLEYPERPASRANTVRSF-----HHE 171

  Fly   307 AKKSDIPINTNDEEYESILSHISSIYIFPEEIQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYL 371
            ....:|| .|::........::|||   ||.   .|..:.::.:||.|:|               
  Rat   172 EHLENIP-GTSESSAFRFFFNLSSI---PEN---EVISSAELRLFREQVD--------------- 214

  Fly   372 RGWDWISAHQPGLLEEIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLGQW---- 432
            :|.||........:.|:.|.|.:  :|..|...|:.:|...:..|..:|.....|:.| :|    
  Rat   215 QGPDWEQGFHRINIYEVMKPPAE--MVPGHLITRLLDTRLVHHNVTRWETFDVSPAVL-RWTREK 276

  Fly   433 -----VAVDLKSLLGNLGSNMTQEILI-----KGAETW--MKSLVVTTDNTSKNPLTVHIEIGSQ 485
                 :|::: :.|....::..|.:.|     :|:..|  ::.|:||..:..:............
  Rat   277 QPNYGLAIEV-THLHQTRTHQGQHVRISRSLPQGSGNWAQLRPLLVTFGHDGRGHTLTRRRAKRS 340

  Fly   486 KKHRRKRSVYMDCTENDHDMRCCRYPLKVNFTSFGWH-FVVAPTSFDAYFCSGDCKVGYLEQYPH 549
            .||..:||       ...:..|.|:.|.|:|:..||: ::|||..:.|::|.|||.....:....
  Rat   341 PKHHPQRS-------RKKNKNCRRHSLYVDFSDVGWNDWIVAPPGYQAFYCHGDCPFPLADHLNS 398

  Fly   550 THLAALTT------SATP--CCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSC 597
            |:.|.:.|      |:.|  ||.||::|::|:||.|:...:||.....|.||||.|
  Rat   399 TNHAIVQTLVNSVNSSIPKACCVPTELSAISMLYLDEYDKVVLKNYQEMVVEGCGC 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 36/99 (36%)
Bmp4XP_063130065.1 None

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