DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and Gdf6

DIOPT Version :10

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_038554.1 Gene:Gdf6 / 242316 MGIID:95689 Length:454 Species:Mus musculus


Alignment Length:521 Identity:117/521 - (22%)
Similarity:178/521 - (34%) Gaps:163/521 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 FQMKVQSKPGKKSTPLAKVSEHGDLSRVQSVSLYRNTLINIESMLQRQLREKAKVDSIESIKMHI 214
            ||....|.....||.|....:.|:..               |..:||..:|.|:.   .:...|.
Mouse    23 FQQASISSSSSSSTELDSTKDVGNRK---------------EGKMQRTPQESAEG---RTPPEHG 69

  Fly   215 LMRLNLKKLP----NITKPIS-----VPQNIIDNFYRDYNASSKTTVWNRMESIDESHLSINDTY 270
            |.:.:|::.|    ...:|..     ||...:.:.|:.|:.:.|              |.||   
Mouse    70 LRQKDLRRRPPGQHQGQEPPGRGLRVVPHEYMLSIYKTYSIAEK--------------LGIN--- 117

  Fly   271 GDHIMTDFFDESSSSQMQGDDANTVNEF----LIDLNKNQAKKSDIPINTNDEEYESILSHISSI 331
                 ..||..|.|       |||:..|    |.||:....::            :..|..:|::
Mouse   118 -----ASFFQSSKS-------ANTITSFVDRGLDDLSHTPLRR------------QKYLFDVSTL 158

  Fly   332 YIFPEEIQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYL---------------------RGWD 375
            ....|.:...:|..|       |...:...|....|||.|                     .||:
Mouse   159 SDKEELVGAELRLYR-------QAPPTPWGLPARPLHLQLFPCLSPLLLDARTLDPQGPTQAGWE 216

  Fly   376 WISAHQPGLLEEIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKSL 440
            .....| ||    :.||.|.:.:.:..|....:......:.:          |..|...:||:||
Mouse   217 VFDVWQ-GL----RPQPWKQLCLELRAAWGELDAGDTGARAR----------GPQQPPPLDLRSL 266

  Fly   441 LGNLGSNMTQEILIKGAETWMKSLVVTTDNTSKNPLT-VHIEIGSQKK----------------- 487
            .........||..:         |||.|.:..||..| :|.::||.:.                 
Mouse   267 GFGRRVRPPQERAL---------LVVFTRSQRKNLFTEMHEQLGSAEAAGAEGSWPAPSGSPDAG 322

  Fly   488 -------HRRKRSVYMDCTENDHD----MRCCRYPLKVNFTSFGW-HFVVAPTSFDAYFCSGDCK 540
                   .||:|:.:.......|.    :||.|.||.|||...|| .:::||..::||.|.|.|.
Mouse   323 SWLPSPGRRRRRTAFASRHGKRHGKKSRLRCSRKPLHVNFKELGWDDWIIAPLEYEAYHCEGVCD 387

  Fly   541 V---GYLEQYPHTHLAALTTSATP------CCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCS 596
            .   .:||...|..:..|..|..|      ||.|||::.:|:||.|..:|:|.....:|.||.|.
Mouse   388 FPLRSHLEPTNHAIIQTLMNSMDPGSTPPSCCVPTKLTPISILYIDAGNNVVYKQYEDMVVESCG 452

  Fly   597 C 597
            |
Mouse   453 C 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 38/100 (38%)
Gdf6NP_038554.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..93 15/82 (18%)
TGFb_propeptide 75..284 CDD:480997 52/280 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 247..268 6/30 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..350 4/46 (9%)
TGF_beta_GDF5_6_7 353..454 CDD:381644 38/101 (38%)

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