DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and dbl-1

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_504709.1 Gene:dbl-1 / 179068 WormBaseID:WBGene00000936 Length:365 Species:Caenorhabditis elegans


Alignment Length:417 Identity:96/417 - (23%)
Similarity:146/417 - (35%) Gaps:139/417 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 ILMRLNLKKLPNITKP-ISVPQNIIDNFYRDYNASSKTTVWNRMESIDESHLSINDTYGDHIMTD 277
            :|.:|.|:.:|..|.| |.|||::.| .|.|.|    ...|            :...|...|:.|
 Worm    54 LLRKLGLEHVPVQTGPSIDVPQHMWD-IYDDDN----DVDW------------VRHYYPKEIIED 101

  Fly   278 FFDESSSSQMQGDDANTVNE-FLIDLNKNQAKKSDIPINTNDEEYESILSHIS------------ 329
                              || ||:..|.:.|.:     |.::||.......:.            
 Worm   102 ------------------NEGFLLSYNLSLAAR-----NAHNEEVTKATLKLRLRRNNKARRSGN 143

  Fly   330 -SIYIFPEEIQPHVRHNRKVDVFRFQIDS-SYSDLSYATLHLYLRGWDWISAHQPGLLEEIKKQP 392
             |||.|.::|...          ||||:| |..:|:           :||               
 Worm   144 ISIYFFEDDINND----------RFQIESRSVDNLT-----------EWI--------------- 172

  Fly   393 RKDIVVT---IHRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKSLLGNLGSNMTQEILI 454
              |..||   :.|..|::........|::.|.:.|..|.|..                       
 Worm   173 --DFDVTAAFLRRTNRISFFIDLPEDVEIEETQSSSLSSLPY----------------------- 212

  Fly   455 KGAETWMKSLVVTTDNTSKNPLTVH----IEIGSQKKHRRKRSVYMDCTENDHDMRCCRYPLKVN 515
              |......|:|.:|  ...|.:|.    .:.|:.::..||:......||.:.:: |.|....|:
 Worm   213 --ARAQSAPLIVFSD--LSEPSSVRRKRSAQTGNSERKNRKKGRKHHNTEAESNL-CRRTDFYVD 272

  Fly   516 FTSFGWH-FVVAPTSFDAYFCSGDC---KVGYLEQYPHTHLAALTTS------ATPCCSPTKMSS 570
            |....|. :::||..:|||.|.|.|   ....|....|..:.:|..|      ..|||.||:.|.
 Worm   273 FDDLNWQDWIMAPKGYDAYQCQGSCPNPMPAQLNATNHAIIQSLLHSLRPDEVPPPCCVPTETSP 337

  Fly   571 LSLLYFDDNHNLVLSVIPNMSVEGCSC 597
            ||:||.|.:..:|:....:|.||.|.|
 Worm   338 LSILYMDVDKVIVIREYADMRVESCGC 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 33/100 (33%)
dbl-1NP_504709.1 TGFb_propeptide <120..>182 CDD:366248 19/99 (19%)
TGF_beta_BMP5_like 264..365 CDD:381639 34/101 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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