DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and tig-2

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_504271.1 Gene:tig-2 / 178864 WormBaseID:WBGene00006570 Length:366 Species:Caenorhabditis elegans


Alignment Length:386 Identity:83/386 - (21%)
Similarity:154/386 - (39%) Gaps:93/386 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   268 DTYGDHIMTDFFDESSSSQMQGDDANTVNE-----FLIDLNKN-QAKKSDIPINT---------- 316
            |:.|.:.:.:...::.:..:.|...:.:.|     |.||:|.| .|.|::..::|          
 Worm    17 DSKGIYFVEERNGKTYTQPLTGQATDKIGEQIRELFNIDINPNGPAVKANNYVSTYMKRLYKQLE 81

  Fly   317 --------NDEEYESILSHISSIYIFPEEIQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLR- 372
                    |:||..:.||....:....:|:      :.::|      |.||| :.:|..|:..: 
 Worm    82 NYEHGENHNEEEVNAWLSADRIVSHMAQEV------SHRLD------DGSYS-IRFAKEHVPAKE 133

  Fly   373 GWDWISA----HQPGLLE------EIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPS 427
            |...:.|    |..|::.      |....|...::|:......|.:.|:.               
 Worm   134 GQSIVRAQLRIHIQGIVSPVFFYIEDTNLPGDTVLVSSDDPTVVTDVTTM--------------- 183

  Fly   428 GLGQWVAVDLKSL-LGNLGSNMTQEILIKGAETWMKSLVVTTDNTSKNP---------LTVHIEI 482
             :.:|..:.|.:| :....::...|:.|:.      .||:...:....|         .|..|..
 Worm   184 -VDRWSHLQLSTLPIVTARASTNDELKIEA------FLVIALKDEDAGPPKKRSRRSASTTPISA 241

  Fly   483 -GSQKKHRRKRSVYMDCTENDHDMRCCRYPLKVNFTSFGW-HFVVAPTSFDAYFCSGDCKVGYLE 545
             ..::|.:|..|.|.: ..|::: ||.|..|.|:|...|| .:|:||..|.|::|||||...:.:
 Worm   242 PPMRQKVKRSESAYFE-KPNENE-RCQRKGLYVDFDILGWKQWVIAPEGFSAFYCSGDCSAPFSK 304

  Fly   546 QYPHT-HLAALTT-------SATPC-CSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSC 597
            :...| |....:|       |.||. |:|:.:.|..:|:.|.|..:.:....:|.|:.|.|
 Worm   305 EMNATSHAIVQSTLHRVRPNSTTPAKCAPSSLGSYKILFVDQNKQVQIKRYRDMVVDECGC 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 33/100 (33%)
tig-2NP_504271.1 TGF_beta_BMP5_like 264..366 CDD:381639 34/102 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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