DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and Gdf5

DIOPT Version :10

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_032135.2 Gene:Gdf5 / 14563 MGIID:95688 Length:495 Species:Mus musculus


Alignment Length:380 Identity:91/380 - (23%)
Similarity:147/380 - (38%) Gaps:93/380 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 ESHLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNEFLIDLNKNQAKKSDIPINTNDEEYESIL 325
            |..||:..|..|   .|....:||.:::...|||:..|   ::|.|..:...   ...:.|...:
Mouse   165 EYMLSLYRTLSD---ADRKGGNSSVKLEAGLANTITSF---IDKGQDDRGPA---VRKQRYVFDI 220

  Fly   326 SHISSIYIFPEEIQPHVRHNRKVDVFRFQIDSS--YSDLSYATLHLYLRGWDWISAHQPGLLEEI 388
            |.:....:...|::  :...:.:||.:..:.||  .:.|..::..         |..||..|.::
Mouse   221 SALEKDGLLGAELR--ILRKKPLDVAKPAVPSSGRVAQLKLSSCP---------SGRQPAALLDV 274

  Fly   389 KKQPRKD----IVVTIHRAIRVANTTSFNPKVKMFEFRHS--IPSGLGQWV---AVDLKSLLGNL 444
            :..|..|    .|..|.:..|              .|::|  :...|..|.   ||||:    .|
Mouse   275 RSVPGLDGSGWEVFDIWKLFR--------------NFKNSAQLCLELEAWERGRAVDLR----GL 321

  Fly   445 GSNMTQEILIKGAETWMKSLVVTTDNTSKNPL--------------TVHIEIGSQKKHRR----- 490
            |...|      ..:...|:|.:....|.|..|              ||:..:.||::.||     
Mouse   322 GFERT------ARQVHEKALFLVFGRTKKRDLFFNEIKARSGQDDKTVYEYLFSQRRKRRAPLAN 380

  Fly   491 ---KRSVYMDCTENDHDMRCCRYPLKVNFTSFGW-HFVVAPTSFDAYFCSGDCKV---GYLEQYP 548
               ||      ...:...||.|..|.|||...|| .:::||..::|:.|.|.|:.   .:||...
Mouse   381 RQGKR------PSKNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTN 439

  Fly   549 HTHLAALTTSATP------CCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSC 597
            |..:..|..|..|      ||.||::|.:|:|:.|..:|:|.....:|.||.|.|
Mouse   440 HAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGC 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 35/100 (35%)
Gdf5NP_032135.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..162
Treacle 34..>146 CDD:460967
TGFb_propeptide 139..338 CDD:480997 44/216 (20%)
TGF_beta_GDF5 393..495 CDD:381669 36/102 (35%)
Blue background indicates that the domain is not in the aligned region.

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