DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and Gdf11

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_034402.1 Gene:Gdf11 / 14561 MGIID:1338027 Length:405 Species:Mus musculus


Alignment Length:439 Identity:113/439 - (25%)
Similarity:184/439 - (41%) Gaps:139/439 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 RQLREKAKVDSIESIKMHILMRLNLKKLPNITK-------PISVP-QNIIDNFYRDYNASSKTTV 252
            |:||       :||||..||.:|.||:.|||::       |.:.| |.|:|              
Mouse    70 RELR-------LESIKSQILSKLRLKEAPNISREVVKQLLPKAPPLQQILD-------------- 113

  Fly   253 WNRMESIDESHLSINDTYGDHIM-TDFFDESSSSQMQGDDANTVNEFLIDLNKNQAKKSDIPINT 316
                         ::|..||.:. .||.:|        |:.:...|.:|.:    |:::|..:.|
Mouse   114 -------------LHDFQGDALQPEDFLEE--------DEYHATTETVISM----AQETDPAVQT 153

  Fly   317 NDEEYESILSHISSIYIFPEEIQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLRGWDWISAHQ 381
            :.                    .|...|      |.|.....::.:..|.|.:|||     ...:
Mouse   154 DG--------------------SPLCCH------FHFSPKVMFTKVLKAQLWVYLR-----PVPR 187

  Fly   382 PG--LLEEIKKQP-------------RKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLGQ 431
            |.  .|:.::.:|             |:.|.:   |::::                 .:.|..|.
Mouse   188 PATVYLQILRLKPLTGEGTAGGGGGGRRHIRI---RSLKI-----------------ELHSRSGH 232

  Fly   432 WVAVDLKSLL--------GNLGSNMTQEILIKGAETWMKSLVVTTDNTSKNPLTVHIEIG-SQKK 487
            |.::|.|.:|        .|.|      |.|...:.....|.||:.......|...:|:. .:..
Mouse   233 WQSIDFKQVLHSWFRQPQSNWG------IEINAFDPSGTDLAVTSLGPGAEGLHPFMELRVLENT 291

  Fly   488 HRRKRSVYMDCTENDHDMRCCRYPLKVNFTSFGWHFVVAPTSFDAYFCSGDCKVGYLEQYPHTHL 552
            .|.:|::.:||.|:..:.|||||||.|:|.:|||.:::||..:.|.:|||.|:..::::||||||
Mouse   292 KRSRRNLGLDCDEHSSESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGQCEYMFMQKYPHTHL 356

  Fly   553 AALTT---SATPCCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSCS 598
            .....   ||.|||:|||||.:::|||:|...::...||.|.|:.|.||
Mouse   357 VQQANPRGSAGPCCTPTKMSPINMLYFNDKQQIIYGKIPGMVVDRCGCS 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 44/93 (47%)
Gdf11NP_034402.1 TGFb_propeptide 59..283 CDD:279078 61/315 (19%)
TGFB 311..405 CDD:214556 43/93 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 113 1.000 Domainoid score I6128
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 159 1.000 Inparanoid score I4237
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001977
OrthoInspector 1 1.000 - - otm43550
orthoMCL 1 0.900 - - OOG6_105895
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2472
SonicParanoid 1 1.000 - - X1292
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.890

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