DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and Gdf10

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_665684.2 Gene:Gdf10 / 14560 MGIID:95684 Length:476 Species:Mus musculus


Alignment Length:130 Identity:48/130 - (36%)
Similarity:66/130 - (50%) Gaps:32/130 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   485 QKKHRRKRSVYMDCTENDHDMRCCRYPLKVNFTSFGWH-FVVAPTSFDAYFCSGDCKVGYLEQYP 548
            ||..||         :.|....|.|..|||:|...||: ::::|.|||||:|:|.|      ::|
Mouse   361 QKARRR---------QWDEPRVCSRRYLKVDFADIGWNEWIISPKSFDAYYCAGAC------EFP 410

  Fly   549 HTHLAALTTSAT----------------PCCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSC 597
            ...:...:..||                |||.|.||:||.:|:.|:|.|.||.|.||||||.|:|
Mouse   411 MPKIVRPSNHATIQSIVRAVGIVPGIPEPCCVPDKMNSLGVLFLDENRNAVLKVYPNMSVETCAC 475

  Fly   598  597
            Mouse   476  475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 42/107 (39%)
Gdf10NP_665684.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..63
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 268..301
TGF_beta 372..475 CDD:278448 42/108 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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