DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and Gdf1

DIOPT Version :10

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_032133.2 Gene:Gdf1 / 14559 MGIID:95683 Length:357 Species:Mus musculus


Alignment Length:265 Identity:68/265 - (25%)
Similarity:97/265 - (36%) Gaps:98/265 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 GWD-----WISAHQPGLLEEIKKQP-------RKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSI 425
            ||:     |..|..||  .|:.:.|       |.|::.|     .||...|....|::....|  
Mouse   150 GWELSVALWADAEHPG--PELLRVPAPPGVLLRADLLGT-----AVAANASVPCTVRLALSLH-- 205

  Fly   426 PSGLGQWVAVDLKSLLGNLGSNMTQEILIKGAETWMKSLVVTTDNTSKNPL-------TVHIEIG 483
            |..         .:..|.|            ||.   ||::.|.:....||       ...:|:|
Mouse   206 PGA---------TAACGRL------------AEA---SLLLVTLDPRLCPLPRLRRHTEPRVEVG 246

  Fly   484 SQKKHRRKRSVYMDCTENDHDMRCCRYPLKVNFTSFGWH-FVVAPTSFDAYFCSGDCKVGYLEQY 547
            .....|.:|                   |.|:|...||| :|:||..|.|.||.|.|.:      
Mouse   247 PVGTCRTRR-------------------LHVSFREVGWHRWVIAPRGFLANFCQGTCAL------ 286

  Fly   548 PHT-------------------HLAALTTSA-TPCCSPTKMSSLSLLYFDDNHNLVLSVIPNMSV 592
            |.|                   |.||.|..| :|||.|.::|.:|:|:||::.|:||....:|.|
Mouse   287 PETLRGPGGPPALNHAVLRALMHAAAPTPGAGSPCCVPERLSPISVLFFDNSDNVVLRHYEDMVV 351

  Fly   593 EGCSC 597
            :.|.|
Mouse   352 DECGC 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 37/111 (33%)
Gdf1NP_032133.2 TGF_beta_SF 251..357 CDD:477357 40/131 (31%)

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