DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myo and admp

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_571951.2 Gene:admp / 140619 ZFINID:ZDB-GENE-011214-1 Length:391 Species:Danio rerio


Alignment Length:471 Identity:115/471 - (24%)
Similarity:179/471 - (38%) Gaps:137/471 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 LSRVQSVSLYRNTLINIESMLQRQLREKAKVDSIESIKMHILMRL----NLKKLPNITKPISVPQ 234
            ||.:..:|..|....|       :|.|...|:|...::...:.||    .::..|........||
Zfish    10 LSTMMGLSFARPGFFN-------ELEEHLAVESEPKVRSEAIRRLLEVFGMEDPPAALGHKQPPQ 67

  Fly   235 NIID--NFYRDYNASSKTTVWNRMESIDESHLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNE 297
            .::|  |...|.:..:|          |.:.|..|      .:..|||:..|.::         |
Zfish    68 YMLDLYNTIADVDGVTK----------DPTLLEGN------TVRSFFDKLHSERI---------E 107

  Fly   298 FLIDLNKNQAKKSDIPINTNDEEYESILSHISSIYIFPEEIQPHV------RHNRKVDVFRFQID 356
            :|  .|.:...||           |.||:  :.:::|  :::|..      .|..:|.|::. :|
Zfish   108 YL--FNMSTVAKS-----------EKILT--AELHLF--KLRPKTSIVLNRHHFCQVSVYQV-LD 154

  Fly   357 SSYSD-------LSYATLHLYLRGWDWISAHQPGLLEEIKKQPRKDIVVTIHRAIRVANTTSFNP 414
            ||..:       ||...:.::..||:                     |.||.:|:|         
Zfish   155 SSKKNVSQGKKLLSSRLVPIHSTGWE---------------------VFTITQAVR--------- 189

  Fly   415 KVKMFEFRHSIPSGLGQWVAV--------DLKSL---LGNLGSNMTQEILIKGAETWMK--SLVV 466
                 .:.....|.||..|:|        |||.:   .|....:..|.:|:...:...:  ||..
Zfish   190 -----SWMSDEGSNLGLLVSVRTLAGSQMDLKMVRFASGRDHHHSKQPMLVLFTDDGRRAASLEA 249

  Fly   467 TTDNTSKNPLTVHIEIGSQKKHRR-KRSVYMDCTENDHDMRCCRYPLKVNFTSFGWH-FVVAPTS 529
            |:..:..:|......:.|....|| .|||  |..|....|.|.|.||.|:|...||. ::|:|..
Zfish   250 TSKGSDVSPGGSSQPLPSVPASRRSSRSV--DYDERGEKMACQRQPLYVDFEEIGWSGWIVSPKG 312

  Fly   530 FDAYFCSGDCKVGYLEQ--YPHTHLAALTTS-----------ATPCCSPTKMSSLSLLYFDDNHN 581
            ::||.|.|.| :..|.|  .|..|  |:..|           .||||.|.|:.|:|||||||:.|
Zfish   313 YNAYHCKGSC-IFPLSQNMRPTNH--AIVQSIINTLKLNKGIQTPCCVPDKLYSISLLYFDDDEN 374

  Fly   582 LVLSVIPNMSVEGCSC 597
            :||....:|....|.|
Zfish   375 VVLKQYDDMVAGSCGC 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 40/104 (38%)
admpNP_571951.2 TGFb_propeptide 40..237 CDD:279078 52/274 (19%)
TGFB 289..391 CDD:214556 41/105 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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