DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myo and mav

DIOPT Version :10

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:XP_061514506.1 Gene:mav / 1280598 VectorBaseID:AGAMI1_014275 Length:667 Species:Anopheles gambiae


Alignment Length:650 Identity:115/650 - (17%)
Similarity:195/650 - (30%) Gaps:266/650 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GWRKYK--------THDQHHRTLKKKTRQNTSDTTVHIEVNSNEIQFPGSYRFNLDSKKINIGRM 64
            ||.:.:        .|..:||.|::|...:.....|:|             ||::..:..:.|:|
Mosquito   225 GWYEQRQLFRFPGSDHTLNHRKLRRKRSLHNDYDLVYI-------------RFDIPMRNASTGQM 276

  Fly    65 NILGHKRGNFRVTRYVTVTVLLILSTAVNAYAQPENKSFSNSSNNDSPEMVMLSNETNNSAKVLS 129
            .       .|:               :.:.|..|..:........|...:|      :|.|..|.
Mosquito   277 T-------GFQ---------------SPSLYHDPRGQHGEEEEEEDDAAVV------DNPANALD 313

  Fly   130 EKNGSSSISADDKINENMGIFQMKVQSKPGKKSTPLAKVSEHGDLSRVQSVSLYRNTLINIESML 194
            ..:.|||.|.                .:||.                                  
Mosquito   314 HSSPSSSHSI----------------HRPGH---------------------------------- 328

  Fly   195 QRQLREKAKVDSIESIKMHILMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKTTVWNRMESI 259
                                  |.:|.:||    ||| |:|                       |
Mosquito   329 ----------------------RQSLSELP----PIS-PEN-----------------------I 343

  Fly   260 DESHLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNEFLIDLNKNQAKKSDIPINTNDEEYESI 324
            :||.|:|                                ::...:|.|:.::..........:..
Mosquito   344 EESSLNI--------------------------------MLTRRQNSARSTNAHSKHQHHSQQQQ 376

  Fly   325 LSH----------ISSIYIFPEEIQPHVRHNRKVDVFRF---QIDSSYSDLSYATLHLYLRGWDW 376
            .:|          .|...:...::|.| .|.||..| ||   |....::......||        
Mosquito   377 QAHQVQQSAPSPPASPAQLHQHQLQAH-GHRRKGRV-RFKQHQQQHHHASQQQHQLH-------- 431

  Fly   377 ISAHQPGLLEEIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDL---- 437
              .|.||         |..:.:.:::.:..........|....:   .||....:|..:.|    
Mosquito   432 --PHHPG---------RATVTIHVYQLVEPYERHFLTSKTVAVQ---EIPPNGSRWYQLPLEEAV 482

  Fly   438 KSLLGNLGSNMTQEILIKGAETWMKSLVVTTDNT------SKNPLTVHIEIGSQKKHRRKRSV-- 494
            ::.|.....|:..|:..:|...  :.:.:..|::      .:.|:   :.:..:...|.|||.  
Mosquito   483 RTWLDGSRKNLGLELYCEGCHA--QDVHIVHDSSPYFRSYDETPV---LNVVGRLVQREKRSKLQ 542

  Fly   495 --------YMD------CTENDHDMRCCRYPLKVNFTSF-GWHFVVAPTSFDAYFCSGDCKVGYL 544
                    |:.      ||..  :.||||:||.|:|... |:.|::.|..|||.||.|.|...: 
Mosquito   543 RYRPQMRDYLSPPKTTACTAG--NKRCCRHPLLVDFRDIEGFDFIIQPKIFDAGFCRGRCPTKF- 604

  Fly   545 EQYPHTHLAALTT---------SATPCCSPTKMSSLSLLYFDDNH--NLVLSVIPNMSVEGCSCS 598
              .|.||.|.|.:         ...|||:|:.:..:.:|:.|..:  .|.:|...||.|..|:||
Mosquito   605 --NPATHHALLQSLLHEHIKYDVPKPCCAPSSLDHIDVLHADPKNPQRLKVSTWHNMRVLECACS 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 35/102 (34%)
mavXP_061514506.1 None

Return to query results.
Submit another query.