DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and Bmp8b

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_031585.2 Gene:Bmp8b / 12164 MGIID:107335 Length:399 Species:Mus musculus


Alignment Length:469 Identity:113/469 - (24%)
Similarity:163/469 - (34%) Gaps:134/469 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 GDLSRVQSVSLYRNTLINIESMLQRQLRE----------KAKVDSIESIKMHILMRLNLKKLPNI 226
            |.||....|...|...:.....:||::||          :|.|.:.:......|..|:|.:....
Mouse    21 GHLSHPPHVFPQRRLGVREPRDMQREIREVLGLPGRPRSRAPVGAAQQPASAPLFMLDLYRAMTD 85

  Fly   227 TKPISVPQ-------------NIIDNFYRDYNASSKTTVWNRMESIDESHLSINDTYGDHIMTDF 278
            ......||             ||::   ||.....:...|.      |.|..:            
Mouse    86 DSGGGTPQPHLDRADLIMSFVNIVE---RDRTLGYQEPHWK------EFHFDL------------ 129

  Fly   279 FDESSSSQMQGDDANTVNEFLIDLNKNQAKKSDIPINTNDEEYESILSHISSIYIFPEEIQPHVR 343
                  :|:...:|.|..||.|     ..:.|..|:||.        .|||..    |.:|.|  
Mouse   130 ------TQIPAGEAVTAAEFRI-----YKEPSTHPLNTT--------LHISMF----EVVQEH-- 169

  Fly   344 HNRKVDVFRFQIDSSYSDLSYATLHLYLRGW---DWISAHQPGLLEEIKKQPRKDIVVTIHRAIR 405
            .||:.|:|       :.||.  ||.....||   |..:|....||..     .||:      .:|
Mouse   170 SNRESDLF-------FLDLQ--TLRSGDEGWLVLDITAASDRWLLNH-----HKDL------GLR 214

  Fly   406 VANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKSLLGNLGSNMTQEILIKGAETWMKSLVVTTDN 470
            :...|         |..|||..||.        .|||.......|..::.....  ....|....
Mouse   215 LYVET---------EDGHSIDPGLA--------GLLGRQAPRSRQPFMVGFFRA--NQSPVRAPR 260

  Fly   471 TSKNPLTVHIEIGSQKKHRRKRSVYMDCTENDHDMRCC-RYPLKVNFTSFGW-HFVVAPTSFDAY 533
            |::......:...:|..|..|....:|.....|....| |:.|.|:|...|| ..|:||..:.||
Mouse   261 TARPLKKKQLNQINQLPHSNKHLGILDDGHGSHGREVCRRHELYVSFRDLGWLDSVIAPQGYSAY 325

  Fly   534 FCSGDCKVGYLEQYP---------HTHLAALTTSATP------CCSPTKMSSLSLLYFDDNHNLV 583
            :|:|:|      .||         |..:.||.....|      ||.||::|::||||:|.|:|::
Mouse   326 YCAGEC------IYPLNSCMNSTNHATMQALVHLMKPDIIPKVCCVPTELSAISLLYYDRNNNVI 384

  Fly   584 LSVIPNMSVEGCSC 597
            |....||.|:.|.|
Mouse   385 LRRERNMVVQACGC 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 38/107 (36%)
Bmp8bNP_031585.2 TGFb_propeptide 32..248 CDD:279078 63/298 (21%)
TGF_beta 298..398 CDD:278448 38/105 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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