DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myo and Bmp3

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_001297606.1 Gene:Bmp3 / 110075 MGIID:88179 Length:470 Species:Mus musculus


Alignment Length:372 Identity:82/372 - (22%)
Similarity:127/372 - (34%) Gaps:100/372 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 NDTYGDHIMTDFFDESSSSQMQGD--------------DANTVNEF------------LIDLNKN 305
            :|...:|::..:...|.||::|..              ..|||..|            |...|..
Mouse    53 HDKVSEHMLWLYDRYSGSSRVQATRTPGSQLPGPQPLRGGNTVRSFRAAAAGTPQTKGLHTFNLT 117

  Fly   306 QAKKSDIPINTNDEEYESILSHISSIYIFPEEIQPHV-RHNRKVDVFRFQIDSSYSD----LSYA 365
            ...||:..::.....|...|.:||.....|:....|. |.:.::|:..:.:.|:.|.    ||..
Mouse   118 SLTKSENILSATLYFYVGELVNISLSCPEPQGCSHHTQRQHIQIDLSAWILKSNQSQLLGHLSVD 182

  Fly   366 TLHLYLRGWDWISAHQPGLLEEIKKQPRKDIVVTI-HRAIRVANTTSFNPK-------------- 415
            .:..|.....|:|.....||.:.|:.....|...| .||..:.....|.|:              
Mouse   183 VVRPYRDSVSWLSKDITQLLRKAKQNEEFLIGFNITSRAHELPKRMLFFPEPYILVYANDAAISE 247

  Fly   416 ----VKMFEFRHSIPSGLGQWVAVDLKSLL----------GNLGSNMTQEILIKGAE-------T 459
                |...:......:|.|..:...::..|          |.|......|  :.|||       .
Mouse   248 PESVVSSLQRHRDFTAGTGPRLDSHVREALSVERRKKRSTGILLPLQNNE--LPGAEYQYKEEGA 310

  Fly   460 W-----MKSLVVTTDNTSKNP-----------LTVHIEIGSQKKHRRKRSVYMDCTENDHDMRCC 508
            |     .|||.......|:|.           .|:..:..:.||.|||:.|        ....|.
Mouse   311 WEERKPYKSLQTQPPEKSRNKKKQRKGSHQKGQTLQFDEQTLKKARRKQWV--------EPRNCA 367

  Fly   509 RYPLKVNFTSFGW-HFVVAPTSFDAYFCSGDCKVGYLEQYPHTHLAA 554
            |..|||:|...|| .::::|.||||::|||.|      |:|...:||
Mouse   368 RRYLKVDFADIGWSEWIISPKSFDAFYCSGAC------QFPMPKVAA 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 21/50 (42%)
Bmp3NP_001297606.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..53 82/372 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..349 6/34 (18%)
TGF_beta 364..>424 CDD:278448 21/51 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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