DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and mstn.1

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:XP_002931568.1 Gene:mstn.1 / 100496408 XenbaseID:XB-GENE-483324 Length:369 Species:Xenopus tropicalis


Alignment Length:420 Identity:110/420 - (26%)
Similarity:186/420 - (44%) Gaps:112/420 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 REKAKVDSIESIKMHILMRLNLKKLPNITK-------PISVP-QNIIDNFYRDYNASSKTTVWNR 255
            |:.:|...:|:||:.||.:|.|::.|||:|       |.:.| :.:||    .|:..|       
 Frog    42 RQNSKSSRLEAIKLQILSKLRLEQAPNISKDAIKYLLPKAPPLEELID----QYDLQS------- 95

  Fly   256 MESIDESHLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNEFLIDLNKNQAKKSDIPINTNDEE 320
                                    |:||...::.||.:...|.:|.:    ..:||   :|.:::
 Frog    96 ------------------------DDSSEGSLEEDDYHATTETIITM----PTESD---STGEKQ 129

  Fly   321 YESILSHISSIYIFPEEIQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLRGWDWISAHQPGLL 385
                                      |...|:|.....|:.::.|.|.:||:             
 Frog   130 --------------------------KCCYFKFSSVVQYNKIAKAQLWIYLK------------- 155

  Fly   386 EEIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKSLLGN------- 443
               ..|.|..:.|...|..:..|..:.:..::..:.  .:..|.|.|.::|:|:.|.|       
 Frog   156 ---PVQKRTTVFVQTFRLPKSLNDGARSTGIRTLKL--EMGPGSGTWKSLDVKTALQNWLKQPAS 215

  Fly   444 -LGSNMTQEILIKGAETWMKSLVVTTDNTSKNPLTVHIEIGSQKKHRRKRSVY-MDCTENDHDMR 506
             ||      |.||..:...:.|.:....::::.|...||:......:|.|..: :||.|:..:.|
 Frog   216 TLG------IEIKACDENGRDLPIAFRGSNEDGLNPFIEVKVMDTPKRSRRDFGLDCDEHSTESR 274

  Fly   507 CCRYPLKVNFTSFGWHFVVAPTSFDAYFCSGDCKVGYLEQYPHTHLAALTT---SATPCCSPTKM 568
            ||||||.|:|.:|||.:::||..:.|.:|||:|.:.:|::||||||.....   ||.|||:||||
 Frog   275 CCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECGIVFLQKYPHTHLVQQANPRGSAGPCCTPTKM 339

  Fly   569 SSLSLLYFDDNHNLVLSVIPNMSVEGCSCS 598
            |.:::|||::|..::...||.|.|:.|.||
 Frog   340 SPINMLYFNENEQIIYGKIPAMVVDRCGCS 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 45/93 (48%)
mstn.1XP_002931568.1 TGFb_propeptide 36..236 CDD:366248 55/285 (19%)
TGF_beta_GDF8 262..369 CDD:381658 48/106 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 114 1.000 Domainoid score I5995
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3850
Inparanoid 1 1.050 163 1.000 Inparanoid score I4091
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001977
OrthoInspector 1 1.000 - - otm48710
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2472
SonicParanoid 1 1.000 - - X1292
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.990

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