DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and bmp8

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:XP_002941697.3 Gene:bmp8 / 100494880 XenbaseID:XB-GENE-485424 Length:425 Species:Xenopus tropicalis


Alignment Length:521 Identity:112/521 - (21%)
Similarity:180/521 - (34%) Gaps:199/521 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 LAKVSEHGDLSRVQSVSLYRNTLINIESMLQRQLREKAKVDSIESIKMHILMRLNLKKLPNITKP 229
            ||.:|....|..:.|.|..:|.|.:  |.:||:|..:.|.:....|       |::..||...:|
 Frog    15 LAAMSILAILWDLTSGSFVKNHLHS--SFIQRKLSGREKREMQREI-------LSIMGLPGRPRP 70

  Fly   230 IS---VPQNIIDNFYRDYNASSKTTVWNRMESIDESHLSINDTYGDHIMTDFFDESSSSQMQGDD 291
            .|   ||.:                          :.|.:.|.|  |.|....||.....:....
 Frog    71 ASGGHVPSS--------------------------APLFMLDLY--HAMCSEEDEDGMPGVSRAH 107

  Fly   292 ANTVNEFLIDLNKNQAKKSDIPINTNDEEYESILSHISSIYIFPEEIQPHVRHNRKVDVFR---- 352
            ..|::            ....|:.|...|.::::|.::.           |.|:|  |:|:    
 Frog   108 FTTLS------------TQSPPLGTVISEADTVMSFVNM-----------VEHDR--DIFQQKPY 147

  Fly   353 ------------------------FQIDSSYSDLSYATLHLYLRGWDWISAHQPGLLEEIKKQPR 393
                                    |::.|...:|: .|||:              .|.||||:..
 Frog   148 WKEFKFDMTQIPTGESVTVAEFRLFKMRSFLRNLN-RTLHI--------------SLFEIKKERG 197

  Fly   394 KDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKS-----LL---GNLGSNMTQ 450
                   ||          .|::.:.:...::....| |:..|:.:     ||   .|||..:..
 Frog   198 -------HR----------EPELTLLDHESTLAGDEG-WLVFDVTAASNHWLLNSKNNLGIRLYV 244

  Fly   451 E-------------ILIKGAETWMKSLVVTTDNTSKNPLTVHIEIGSQKKHRRKRSVYMDCTEND 502
            |             ||.:.|....:..:||....|:|    .|......|..|||.      :..
 Frog   245 ETDQGQSIDPGIAGILGRRAPRSKQPFMVTFFRVSRN----QIRSARAVKQLRKRQ------QKK 299

  Fly   503 HDMR--------------------CCRYPLKVNFTSFGW-HFVVAPTSFDAYFCSGDCKVGYLEQ 546
            ||:.                    |.|:.|.|:|...|| .:|:||..:.|::|.|:|      .
 Frog   300 HDLPHPNKLPGILDHLHVTDSRQVCKRHELYVSFRDLGWLDWVIAPQGYSAFYCEGEC------S 358

  Fly   547 YP---------HTHLAALTTSATP------CCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCS 596
            :|         |..|.:|.....|      ||:|||:|:.|:||:|.|:|::|....||.|:.|.
 Frog   359 FPLDSCMNATNHAILQSLVHLMKPESVPKACCAPTKLSATSVLYYDSNNNVILKKHRNMVVKSCG 423

  Fly   597 C 597
            |
 Frog   424 C 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 36/126 (29%)
bmp8XP_002941697.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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