DRSC/TRiP Functional Genomics Resources

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Protein Alignment myo and bmp16

DIOPT Version :10

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_001165247.1 Gene:bmp16 / 100329171 ZFINID:ZDB-GENE-100115-1 Length:416 Species:Danio rerio


Alignment Length:452 Identity:99/452 - (21%)
Similarity:178/452 - (39%) Gaps:124/452 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 KVDSI------ESIKMHILMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKTTVWNRMESIDE 261
            |:||:      .:|:..:|.||.|:..||.:....|||.::| .||.:     |..::.:|..:.
Zfish    31 KLDSLLEPSLAHTIQNLLLTRLGLQSHPNPSTKAQVPQYLLD-LYRFH-----TQQYHLIEDPEF 89

  Fly   262 SHLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNEFLIDLNKNQAKKSDIPINTNDEEYESIL- 325
            |:.|.:....:.:......:|.:..:..:...||:...|..|     .|.||      ..||:: 
Zfish    90 SYPSKHVQGANTVRCFHHTDSPTPSLPEEQKTTVDGIHIGFN-----LSSIP------SEESVVS 143

  Fly   326 -------------SHISSIYIFPEE--IQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLRGWD 375
                         ||::|:|:...:  .:|.:.|:|::.          .|...|.|      |:
Zfish   144 AELRLLHEGSSGGSHVASLYLSNHDPSSKPILLHSRQLT----------RDRKSAQL------WE 192

  Fly   376 WISAHQPGLLEEIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKSL 440
            .....:.......|.......::.:   |..:|::|..||.:....|.|                
Zfish   193 TFPLDREVFQNLSKTSGSLSFILDV---IPDSNSSSTLPKDRHLRVRRS---------------- 238

  Fly   441 LGNLGSNMTQEILIKGAETW--MKSLVVTTDNTSKNPLTVHIEIGSQKKHRRKRSVY-------- 495
                        .::...||  .:.|:||..:..::...|::   :::|..|.||.:        
Zfish   239 ------------TLQDGPTWERQRPLLVTYSHDGRSEPFVNL---NKRKSSRSRSRWTRFKGDRG 288

  Fly   496 --MDCTE-----NDH---------DMRCCRYPLKVNFTSFGWH-FVVAPTSFDAYFCSGDCK--- 540
              .|..|     |:.         ..||.|:||.|:|...||: :::||:.:||:||.|:|:   
Zfish   289 QGSDWNERRVKRNNRRAAKLKRLSRARCRRHPLYVDFKDVGWNKWIIAPSGYDAFFCLGECRFPL 353

  Fly   541 VGYLEQYPHTHLAALTTSAT-----PCCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSC 597
            ..::....|..:..|.:|..     |||.||.:|.::||:.|....:||....:|.||||.|
Zfish   354 ADHMNSSSHAMVQTLVSSVNGAVPRPCCVPTALSPIALLFLDQEERVVLKNYQDMVVEGCGC 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta_GDF8_like 506..597 CDD:381629 36/99 (36%)
bmp16NP_001165247.1 TGFb_propeptide 44..256 CDD:480997 50/275 (18%)
TGF_beta_SF 314..416 CDD:477357 37/102 (36%)

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