DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myo and bmp16

DIOPT Version :9

Sequence 1:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_001165247.1 Gene:bmp16 / 100329171 ZFINID:ZDB-GENE-100115-1 Length:416 Species:Danio rerio


Alignment Length:452 Identity:99/452 - (21%)
Similarity:178/452 - (39%) Gaps:124/452 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 KVDSI------ESIKMHILMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKTTVWNRMESIDE 261
            |:||:      .:|:..:|.||.|:..||.:....|||.::| .||.:     |..::.:|..:.
Zfish    31 KLDSLLEPSLAHTIQNLLLTRLGLQSHPNPSTKAQVPQYLLD-LYRFH-----TQQYHLIEDPEF 89

  Fly   262 SHLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNEFLIDLNKNQAKKSDIPINTNDEEYESIL- 325
            |:.|.:....:.:......:|.:..:..:...||:...|..|     .|.||      ..||:: 
Zfish    90 SYPSKHVQGANTVRCFHHTDSPTPSLPEEQKTTVDGIHIGFN-----LSSIP------SEESVVS 143

  Fly   326 -------------SHISSIYIFPEE--IQPHVRHNRKVDVFRFQIDSSYSDLSYATLHLYLRGWD 375
                         ||::|:|:...:  .:|.:.|:|::.          .|...|.|      |:
Zfish   144 AELRLLHEGSSGGSHVASLYLSNHDPSSKPILLHSRQLT----------RDRKSAQL------WE 192

  Fly   376 WISAHQPGLLEEIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKSL 440
            .....:.......|.......::.:   |..:|::|..||.:....|.|                
Zfish   193 TFPLDREVFQNLSKTSGSLSFILDV---IPDSNSSSTLPKDRHLRVRRS---------------- 238

  Fly   441 LGNLGSNMTQEILIKGAETW--MKSLVVTTDNTSKNPLTVHIEIGSQKKHRRKRSVY-------- 495
                        .::...||  .:.|:||..:..::...|::   :::|..|.||.:        
Zfish   239 ------------TLQDGPTWERQRPLLVTYSHDGRSEPFVNL---NKRKSSRSRSRWTRFKGDRG 288

  Fly   496 --MDCTE-----NDH---------DMRCCRYPLKVNFTSFGWH-FVVAPTSFDAYFCSGDCK--- 540
              .|..|     |:.         ..||.|:||.|:|...||: :::||:.:||:||.|:|:   
Zfish   289 QGSDWNERRVKRNNRRAAKLKRLSRARCRRHPLYVDFKDVGWNKWIIAPSGYDAFFCLGECRFPL 353

  Fly   541 VGYLEQYPHTHLAALTTSAT-----PCCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSC 597
            ..::....|..:..|.:|..     |||.||.:|.::||:.|....:||....:|.||||.|
Zfish   354 ADHMNSSSHAMVQTLVSSVNGAVPRPCCVPTALSPIALLFLDQEERVVLKNYQDMVVEGCGC 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myoNP_726604.1 TGF_beta 506..597 CDD:278448 36/99 (36%)
bmp16NP_001165247.1 TGFb_propeptide 43..256 CDD:279078 50/276 (18%)
TGFB 316..416 CDD:214556 36/100 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.