DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11360 and Mex3a

DIOPT Version :9

Sequence 1:NP_001259068.1 Gene:CG11360 / 43810 FlyBaseID:FBgn0039920 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001025061.2 Gene:Mex3a / 72640 MGIID:1919890 Length:520 Species:Mus musculus


Alignment Length:624 Identity:230/624 - (36%)
Similarity:288/624 - (46%) Gaps:176/624 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LSDDPRTLQLAL-ELSLVGFND-------------NQNCYAQPA-----QPLPMPLSARSDFEIG 88
            |.:|.|.||||| :|.|:|..:             .....||||     .|.|.|.:|.:.....
Mouse    31 LLEDERALQLALDQLCLLGLGEPPAPTAGEDGGGGGGGAPAQPAAPPQPAPPPPPAAAPAAPSAA 95

  Fly    89 TINSTLPIPSAPN-------CLLLPNAGAVSSEDRSKKSQNMTECVPVPSSEHVAEIVGRQGCKI 146
            ....|...|:||.       |.|...|     |.|.|.|.|.|||||||:|||||||||||||||
Mouse    96 PAAQTPQPPTAPKGANDAKLCALYKEA-----ELRLKGSSNTTECVPVPTSEHVAEIVGRQGCKI 155

  Fly   147 KALRAKTNTYIKTPVRGEEPVFVVTGRKEDVNKAKREILSAADHFSLIRASRKPVSDSQNNGMVG 211
            ||||||||||||||||||||||:||||:|||..|:|||:|||:|||:|||||             
Mouse   156 KALRAKTNTYIKTPVRGEEPVFMVTGRREDVATARREIISAAEHFSMIRASR------------- 207

  Fly   212 STTSSGGGAVPRMSGPPCMPGQVTIQVRVPYRVVGLVVGPKGATIKHIQQETQTYIVTPSREKEP 276
               :..|.|   ....|.:||||||:||||||||||||||||||||.|||:|.|||:||||:::|
Mouse   208 ---NKSGAA---FGVAPALPGQVTIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDP 266

  Fly   277 IFEVTGLPDNVDTARKQIEAHIALRTG---SGSGSGDAITMQSSDSVDTKEYASLPSLTQILNDD 338
            :||:||.|.||:.||::||.|||:|||   ..:..||.:......::|::               
Mouse   267 VFEITGAPGNVERAREEIETHIAVRTGKILEYNSDGDFLAGSPDAALDSR--------------- 316

  Fly   339 LNSEILSSIYKNSVPSTQ---EYANNSMKTVVNVSNSVKLVQGHHTGNCFQKSEFAEMEMTANIT 400
                 .|..::...|..:   .:..||:..:               |.|...|.|....::....
Mouse   317 -----YSDAWRVHAPGCKPLSTFRQNSLGCI---------------GECGVDSAFEAPRLSEQGG 361

  Fly   401 AADILDKRLPGNEVSVPLAKANVANIVFRTTSSKTLSFCPP--------TSTSASFHSNCNANIL 457
            .........||..|    .|.:|...|..|:        ||        |.||..|         
Mouse   362 DFGYSGYLFPGYGV----GKQDVYYGVAETS--------PPLWAGQENATPTSVLF--------- 405

  Fly   458 TRSCSSASSTTSTKSTNNSANTPPEILNIWKSISDSIDVDEGIGDSPSIWNQPANIIPTAHCSPT 522
                |||||::|:.    .|...|                                 |.||.||.
Mouse   406 ----SSASSSSSSA----KARAGP---------------------------------PGAHRSPA 429

  Fly   523 ISISPTDSLLGMGEHSANQQNLNHAKEPIMPNLPQKIKGIQVQSNADNFLTHRECFVCNENTVTT 587
            .|..| :.|.|:......        ||:.........|::...:.      |:|.||.|:.||.
Mouse   430 TSAGP-EQLTGLPRRPPG--------EPLQGFSKLGTGGLRSPGSG------RDCMVCFESEVTA 479

  Fly   588 ALVPCGHNMFCMECANHICLSMDAVCPVCNSIVYHAMRI 626
            ||||||||:||||||..||...|..||||:.....|:||
Mouse   480 ALVPCGHNLFCMECAVRICERTDPECPVCHITATQAIRI 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11360NP_001259068.1 KH-I 124..185 CDD:238053 54/60 (90%)
KH 233..298 CDD:197652 47/64 (73%)
zf-C3HC4_3 575..620 CDD:290631 28/44 (64%)
Mex3aNP_001025061.2 KH-I 133..193 CDD:238053 53/59 (90%)
KH 223..288 CDD:197652 47/64 (73%)
zf-C3HC4_3 465..508 CDD:290631 26/48 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836614
Domainoid 1 1.000 109 1.000 Domainoid score I6343
eggNOG 1 0.900 - - E1_KOG2113
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001319
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23285
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5311
SonicParanoid 1 1.000 - - X819
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.830

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