DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11360 and Mex3c

DIOPT Version :10

Sequence 1:NP_651934.2 Gene:CG11360 / 43810 FlyBaseID:FBgn0039920 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001034303.3 Gene:Mex3c / 240396 MGIID:2652843 Length:652 Species:Mus musculus


Alignment Length:629 Identity:229/629 - (36%)
Similarity:289/629 - (45%) Gaps:216/629 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 TINSTLPIPSAP-NCLLLPNAG----------------------------------------AVS 112
            |.:.|.|||..| ..:|||.||                                        |::
Mouse   147 TASQTQPIPGGPLGSVLLPAAGFDAREAAAAGVLYGGDDAQGMMAAMLSHAYGPGGGGAAAAALN 211

  Fly   113 SEDRS---KKSQNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRK 174
            .|..:   :||.|.|||||||||||||||||||||||||||||||||||||||||||:|||||||
Mouse   212 GEQAALLRRKSVNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPIFVVTGRK 276

  Fly   175 EDVNKAKREILSAADHFSLIRASRKPVSDSQNNGMVGSTTSSGGGAVPRMSGPPCMPGQVTIQVR 239
            |||..|||||||||:|||:|||||                :..|.|:..:|..|.:|||.|:|||
Mouse   277 EDVAMAKREILSAAEHFSMIRASR----------------NKNGPALGGLSCSPNLPGQTTVQVR 325

  Fly   240 VPYRVVGLVVGPKGATIKHIQQETQTYIVTPSREKEPIFEVTGLPDNVDTARKQIEAHIALRTGS 304
            ||||||||||||||||||.|||:|.||||||||:|||:|||||:|:|||.||::||.|||:|||:
Mouse   326 VPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEMHIAMRTGN 390

  Fly   305 GSGSGDAITMQSSDSVDTKEYASLPSLTQILNDDLNSEILSSIYKNSVPSTQEYANNSMKTVVNV 369
                                |.           :||.|                  |..      
Mouse   391 --------------------YI-----------ELNEE------------------NDF------ 400

  Fly   370 SNSVKLVQGHHTGN--CFQKSEFAEMEMTANITAADILDKRLPGNEVSVPLAKANVANIVFRTTS 432
                     |:.|.  .|:........:::|                .||.::|.:.: .:|..|
Mouse   401 ---------HYNGTDVSFEGGTLGSAWLSSN----------------PVPPSRARMMS-NYRNDS 439

  Fly   433 SKTLSFCPPTSTSASFHSNCNANILTRSCSSASSTTSTKSTNN--SANTPPEILNIWKSISDSID 495
            |.:|.   ..||.:.|.||..|:.         |.||..||.|  ..:|.|.:      .|:.:.
Mouse   440 SSSLG---SGSTDSYFGSNRLADF---------SPTSPFSTGNFWFGDTLPSV------GSEDLT 486

  Fly   496 VDEGIGDSPSIWNQPANIIPTAHCSPTISISPTDSLLGMG-EHSANQQNLNHAKEP----IMPNL 555
            ||....||          :||:..:......|.:.|.|.| :.|.|.:......:|    :.|..
Mouse   487 VDSPAFDS----------LPTSAQTIWTPFEPVNPLSGFGSDPSGNMKTQRRGSQPSTPRLSPTF 541

  Fly   556 PQKIK------------------GIQVQ----SNADNFLT----------------HRECFVCNE 582
            |:.|:                  |:.:.    ||..|..:                ..:|.:|.|
Mouse   542 PESIEHPLARRVRSDPPSTGNHVGLPIYIPAFSNGTNSYSSSNGGSTSSSPPESRRKHDCVICFE 606

  Fly   583 NTVTTALVPCGHNMFCMECANHICLSMDAVCPVCNSIVYHAMRI 626
            |.|..||||||||:|||||||.||......||||.:.|..|::|
Mouse   607 NEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAIQI 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11360NP_651934.2 KH-I_MEX3_rpt1 123..195 CDD:411851 65/71 (92%)
KH-I_MEX3_rpt2 231..302 CDD:411852 56/70 (80%)
PEX10 <515..621 CDD:227861 42/148 (28%)
RING-HC_MEX3 575..627 CDD:438181 29/52 (56%)
Mex3cNP_001034303.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..39
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..136
KH-I_MEX3_rpt1 225..297 CDD:411851 65/71 (92%)
KH-I_MEX3_rpt2 317..388 CDD:411852 56/70 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 429..448 5/22 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 506..566 10/59 (17%)
RING-HC_MEX3C 598..652 CDD:438382 29/53 (55%)
Blue background indicates that the domain is not in the aligned region.

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