DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11360 and Mex3d

DIOPT Version :9

Sequence 1:NP_001259068.1 Gene:CG11360 / 43810 FlyBaseID:FBgn0039920 Length:628 Species:Drosophila melanogaster
Sequence 2:XP_006513682.1 Gene:Mex3d / 237400 MGIID:2681847 Length:732 Species:Mus musculus


Alignment Length:644 Identity:234/644 - (36%)
Similarity:301/644 - (46%) Gaps:148/644 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 MSEQSKVNESTLPLSDDPRTLQLALELSLVGFNDNQNCYAQPAQPLPMPLSARSDFEIGTINSTL 94
            |:..|.|....|||.|                        ....|.|.|....:.|        .
Mouse   174 MAVASSVAPGGLPLLD------------------------PDVSPRPSPPDVFASF--------A 206

  Fly    95 PIPSA--PNCLLLPNAGAVSSEDRSKKSQNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYI 157
            |.|:|  |:.||......:.|.   |||.||||||||||||||||||||||||||||||||||||
Mouse   207 PHPAALGPSTLLAEQLNVIGSR---KKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYI 268

  Fly   158 KTPVRGEEPVFVVTGRKEDVNKAKREILSAADHFSLIRASRKPVSDSQNNGMVGSTTSSGGGAVP 222
            |||||||||||:||||||||..|||||||||:|||||||:|     |:..|:.|:|         
Mouse   269 KTPVRGEEPVFIVTGRKEDVEMAKREILSAAEHFSLIRATR-----SKAGGLSGAT--------- 319

  Fly   223 RMSGPPCMPGQVTIQVRVPYRVVGLVVGPKGATIKHIQQETQTYIVTPSREKEPIFEVTGLPDNV 287
              .|||.:|||.|||||||||||||||||||||||.|||.|.||||||.|:|||:|.|||:|:||
Mouse   320 --PGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENV 382

  Fly   288 DTARKQIEAHIALRTGSGSGSGDAITMQSSDSVDTKEY----ASL-----------PSLTQILND 337
            |.||::|||||.||||:.:.||......::.:....:.    |||           |:.|..|..
Mouse   383 DRAREEIEAHITLRTGAFTDSGPDSDFHANGTDVCLDLLGAAASLWAKAPHPGRRPPAATGGLRG 447

  Fly   338 DLNSEILSSIYKNSVPSTQEYANNSMKTVVNVSNSVKLVQGHHTG------------------NC 384
            |      :::...|.|......:.....:.:.|.|.......:.|                  :|
Mouse   448 D------NALGAASTPEPFYVGSRGGPPLPDPSPSSPYGGSGNGGFTFGGDGPSAPTGTATPEDC 506

  Fly   385 FQKSEFAEMEMTANITAADILDKRLPGNEVSVPLAKANVANIVFRTTSSKTLSFCPPTSTSASFH 449
            ....:|..:::|...||.           :..|..:|         ......|.||..:.:.:  
Mouse   507 DFGFDFLALDLTVPATAT-----------IWAPFERA---------APLPAFSGCPAVNGAPA-- 549

  Fly   450 SNCNANILTRSCSSASSTTSTKSTNNSANTP-PEILNIWKSISDSIDVDEGIGDSPSIWNQPANI 513
               ..|..||..|...:.|:.:   :|...| |..|::...::.. .|.:.:|..|  |..|.:.
Mouse   550 ---QPNTGTRRSSGGGAATTPR---HSPTLPEPGGLSLELPLARR-SVPDPVGAVP--WRPPQSA 605

  Fly   514 IPTAHCSPTISISPT-----------DSLLGMGEHSANQQNLNHAKEPIMPNLPQKIKGIQVQSN 567
            :|....|.|.|.:|:           |::...|.|..:....|.:.....|..|.....      
Mouse   606 LPPFSGSTTFSTTPSLPSTTLASSTLDTVPSEGNHKPSTTAANSSASTAAPGPPSAALA------ 664

  Fly   568 ADNFLTHRECFVCNENTVTTALVPCGHNMFCMECANHICLSMDAVCPVCNSIVYHAMRI 626
                   |||.||:|.....||||||||:|||:||..||...:..||.|.:....|:|:
Mouse   665 -------RECVVCSEGEAMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIRV 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11360NP_001259068.1 KH-I 124..185 CDD:238053 57/60 (95%)
KH 233..298 CDD:197652 51/64 (80%)
zf-C3HC4_3 575..620 CDD:290631 24/44 (55%)
Mex3dXP_006513682.1 PHA03247 <27..215 CDD:223021 14/72 (19%)
KH-I 235..296 CDD:238053 57/60 (95%)
KH 328..393 CDD:197652 51/64 (80%)
RING_Ubox 665..709 CDD:388418 24/43 (56%)
RING-HC finger (C3HC4-type) 667..706 CDD:319361 21/38 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 120 1.000 Domainoid score I5738
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 343 1.000 Inparanoid score I2317
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351875at33208
OrthoFinder 1 1.000 - - FOG0001319
OrthoInspector 1 1.000 - - otm43568
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23285
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X819
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.070

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