DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11360 and mex-3

DIOPT Version :9

Sequence 1:NP_001259068.1 Gene:CG11360 / 43810 FlyBaseID:FBgn0039920 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_490681.2 Gene:mex-3 / 171607 WormBaseID:WBGene00003229 Length:443 Species:Caenorhabditis elegans


Alignment Length:445 Identity:170/445 - (38%)
Similarity:217/445 - (48%) Gaps:110/445 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 QNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVNKAKREIL 185
            ||:||.|.||:|||||||||||||||||||||||||||||||||:|:||||||.||||:|||||.
 Worm    76 QNVTESVEVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEDPIFVVTGRLEDVNEAKREID 140

  Fly   186 SAADHFSLIRASRKPVSDSQNNGMVGSTTSSGGGAVPRMSGPPCMPGQVTIQVRVPYRVVGLVVG 250
            .||:||:.|||||:              .:.|..|          |||:|..||||.||||||||
 Worm   141 CAAEHFTQIRASRR--------------HTQGAHA----------PGQITSYVRVPLRVVGLVVG 181

  Fly   251 PKGATIKHIQQETQTYIVTPSREKEPIFEVTGLPDNVDTARKQIEAHIALRTGSGSGSGDAITMQ 315
            |||||||.|||:|.|||:|||||:||:|||||||.||:.|||:||.||..|||:         :.
 Worm   182 PKGATIKRIQQDTHTYIITPSREREPVFEVTGLPHNVEAARKEIETHIFQRTGN---------LP 237

  Fly   316 SSDSVDTKEYASLPSLTQILNDDLNSEILSSIYKNSVPSTQEYANNSMKTVVNVSNSVKLVQGHH 380
            .:|:....:.|.:..:.|                     .|:.|...|:.....|...:...|: 
 Worm   238 ETDNDFAGQLAGVSLMVQ---------------------KQQQAQQQMQEAQQQSMFYRRAFGN- 280

  Fly   381 TGNCFQKSEFAEMEMTANITAADILDKRLP-GNEVSVPLAKANVANIVFRTTSSKTLSFCPP--T 442
                  .:.|.:.||:::           | |.|.|:.|      :.:.|:..|...|..|.  :
 Worm   281 ------SNPFNQKEMSSS-----------PFGMESSLGL------DALLRSFPSMRSSLTPESLS 322

  Fly   443 STSASFHSNCNANILTRSCSSASSTTSTKSTNNSANTPPE---------ILNIWKS--------- 489
            .|..|...:....   :|......|.....||||.|...|         .|:.|.|         
 Worm   323 GTGLSSRPSLGGG---QSAKQDLPTYDYWGTNNSLNDIMENEILSRKYDALSAWSSMGLEKREES 384

  Fly   490 -----ISDSIDVDEGIGDSPSIWN-QPANIIPTAHCSPTISISPTDSLLGMGEHS 538
                 :|.......|.|...:||: ...|:.|.:..|  .|.|||.|.....:|:
 Worm   385 PTNGLMSSLKGTSAGFGLLSTIWSGGNMNLSPGSLAS--ASASPTSSTCDHNDHT 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11360NP_001259068.1 KH-I 124..185 CDD:238053 53/60 (88%)
KH 233..298 CDD:197652 49/64 (77%)
zf-C3HC4_3 575..620 CDD:290631
mex-3NP_490681.2 KH-I 79..139 CDD:238053 52/59 (88%)
KH 164..229 CDD:197652 49/64 (77%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166551
Domainoid 1 1.000 110 1.000 Domainoid score I3972
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4937
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001319
OrthoInspector 1 1.000 - - oto19844
orthoMCL 1 0.900 - - OOG6_106586
Panther 1 1.100 - - LDO PTHR23285
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5311
SonicParanoid 1 1.000 - - X819
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.820

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