DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11360 and mex3a

DIOPT Version :9

Sequence 1:NP_001259068.1 Gene:CG11360 / 43810 FlyBaseID:FBgn0039920 Length:628 Species:Drosophila melanogaster
Sequence 2:XP_031746582.1 Gene:mex3a / 100487129 XenbaseID:XB-GENE-5910152 Length:466 Species:Xenopus tropicalis


Alignment Length:617 Identity:213/617 - (34%)
Similarity:270/617 - (43%) Gaps:213/617 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 DDPRTLQLAL-ELSLVGFND-----NQNCYAQPAQPLPMPLSARSDFEIGTINSTLPIPSAPNCL 103
            :|.|.||:|| :|.|:|..:     |.|..:..:.....|....|..                |.
 Frog    26 EDDRALQIALDQLCLLGLGESEEDSNNNNSSGSSSGSGQPHKGESKL----------------CA 74

  Fly   104 LLPNAGAVSSEDRSKKSQNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVF 168
            |...|      :...||.|.|||||||||||||||||||||||||||||||||||||||||||||
 Frog    75 LYKEA------ELRLKSSNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVF 133

  Fly   169 VVTGRKEDVNKAKREILSAADHFSLIRASRKPVSDSQNNGMVGSTTSSGGGAVPRMSGPPCMPGQ 233
            :||||:|||..|:|||:|||:|||:|||||....           |:.|..        |.:|||
 Frog   134 MVTGRREDVAMARREIISAAEHFSMIRASRNKAG-----------TAFGSA--------PTLPGQ 179

  Fly   234 VTIQVRVPYRVVGLVVGPKGATIKHIQQETQTYIVTPSREKEPIFEVTGLPDNVDTARKQIEAHI 298
            |||:||||||||||||||||||||.|||:|.|||:||||:::|:||:||.|.||:.||::||.||
 Frog   180 VTIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHI 244

  Fly   299 ALRTGSGSGSGDAITMQSSDSVDTKEYASLPSLTQILNDDLNSEILSSIYKNSVPSTQEYANNSM 363
            |:|||                             :||..:..::.|||...:.:.|  .|..:..
 Frog   245 AVRTG-----------------------------KILEYNNENDFLSSSPDSGMES--RYPESWR 278

  Fly   364 KTVVNVSNSVKLVQGHHTGNCFQKSEFAEMEMTANITAADILDKRLPGNEVSVPLAKANVANIVF 428
                        |.|..||                                              
 Frog   279 ------------VHGTATG---------------------------------------------- 285

  Fly   429 RTTSSKTLSFCPPTSTSASFHSNCNANILTRSCSSASSTTSTKSTNNSANTPPEILNIWKSISDS 493
                      |.|.||   |..|                    |.....:.|||.:.....::|.
 Frog   286 ----------CKPLST---FRQN--------------------SLGCIGDCPPEPVYETPRLNDQ 317

  Fly   494 ID-------------VDEGIGDSPS-IWNQPANIIP---------------TAHCSPTISISPTD 529
            .|             |..|:.:|.. :|....|..|               :...:.|...||.:
 Frog   318 NDFNYGYLFPNYKQEVYYGVPESGGPMWGGQENTNPAPGIFTKQQRSGSSGSVQTTTTTQRSPEN 382

  Fly   530 SLLGMGEHSANQQNLNHAKEPIMPNLPQKIKGIQVQSNADNFLTHRECFVCNENTVTTALVPCGH 594
            ||..:...|..:.            ||...|   :.:..::....|||.||.|:.||.|||||||
 Frog   383 SLSTLQRRSQGEA------------LPGFTK---LTATRNSISGSRECMVCFESEVTAALVPCGH 432

  Fly   595 NMFCMECANHICLSMDAVCPVCNSIVYHAMRI 626
            |:||||||..||...:..||||::....|:||
 Frog   433 NLFCMECAVRICERNEPECPVCHASATQAIRI 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11360NP_001259068.1 KH-I 124..185 CDD:238053 55/60 (92%)
KH 233..298 CDD:197652 47/64 (73%)
zf-C3HC4_3 575..620 CDD:290631 28/44 (64%)
mex3aXP_031746582.1 KH-I 88..160 CDD:412160 62/71 (87%)
KH-I 177..248 CDD:412160 52/70 (74%)
RING-HC_MEX3A 413..455 CDD:319634 27/41 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 116 1.000 Domainoid score I5928
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 336 1.000 Inparanoid score I2348
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351875at33208
OrthoFinder 1 1.000 - - FOG0001319
OrthoInspector 1 1.000 - - otm48729
Panther 1 1.100 - - O PTHR23285
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X819
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

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