DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11360 and mex3a

DIOPT Version :9

Sequence 1:NP_001259068.1 Gene:CG11360 / 43810 FlyBaseID:FBgn0039920 Length:628 Species:Drosophila melanogaster
Sequence 2:XP_009290942.1 Gene:mex3a / 100332760 ZFINID:ZDB-GENE-130201-1 Length:502 Species:Danio rerio


Alignment Length:644 Identity:217/644 - (33%)
Similarity:285/644 - (44%) Gaps:189/644 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IQKKNQAQHHDMSEQSKVNESTL----PLSDDPRTLQLAL-ELSLVGFNDNQ------------- 65
            |.:||.....|::.....:|..|    ...||.|.|::|| :|||:|..:.:             
Zfish    10 IMEKNGGYGGDLAGSGFGSEGLLVPPEEEEDDSRALRVALGQLSLLGLGEGEDGAPAGGGGGGGG 74

  Fly    66 ------NCYAQPAQPLPMPLSARSDFEIGTINSTLPIPSAPNCLLLPNAGAVSSEDRSKKSQNMT 124
                  |.:....|..|..|..::..                |.|..:    |..:...:..|:|
Zfish    75 VQDRSNNNHHNHIQAEPGMLQGKNKL----------------CALYES----SPTETKGRGCNIT 119

  Fly   125 ECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVNKAKREILSAAD 189
            ||||||||||||||||||||||||||||||||||||||||||||::|||||||..|:|||:|||:
Zfish   120 ECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFLITGRKEDVALARREIISAAE 184

  Fly   190 HFSLIRASRKPVSDSQNNGMVGSTTSSGGGAVPRMSGPPC-MPGQVTIQVRVPYRVVGLVVGPKG 253
            |||::||||...|.|                      ||. :|||.|||||||||||||||||||
Zfish   185 HFSMLRASRNKFSGS----------------------PPAPLPGQTTIQVRVPYRVVGLVVGPKG 227

  Fly   254 ATIKHIQQETQTYIVTPSREKEPIFEVTGLPDNVDTARKQIEAHIALRTG---SGSGSGDAITMQ 315
            :|||.|||:|.||||||||:::|:||:||.|.|.:.||::||||||.|||   ..:...|.:..:
Zfish   228 STIKRIQQQTCTYIVTPSRDRDPVFEITGSPGNAERAREEIEAHIAFRTGGLHDHNNENDCLGPE 292

  Fly   316 SSDSVDTKEYASLPSLTQILNDDLNSEILSSIY----KNSVPSTQEYANNSMKTVVNVSNSVKLV 376
            |.                  |..|.|. |..::    ....|....|..|...|||..|:.    
Zfish   293 SG------------------NGGLESR-LQQVWGLQGAPRKPLASSYRQNFSDTVVGSSSG---- 334

  Fly   377 QGHHTGNCFQKSEFAEMEMTANITAADILDKRLPGNEVSVPLAKANVANIVFRTTSSKTLSF--- 438
               ..|..:.|.:|.....:.:..::..      |:|.:......:....|......::.||   
Zfish   335 ---GGGGIYSKGDFNNHGSSGDKPSSYF------GSEGTQSWGDPDYPKQVAYYAQQRSKSFGGL 390

  Fly   439 -CPPTSTSASFHSNCNANILTRSCSSASSTTSTKSTNNSANTPPEILNIWKSISDSIDVDEGIGD 502
             .|.|..|......|                                              |.|:
Zfish   391 PLPLTRLSPGLPEPC----------------------------------------------GTGN 409

  Fly   503 SPSIWNQPANIIPTAHCSPTISISPTDSLLGMGEHSANQQNLNHAKEPIMPNLPQKIKGIQVQSN 567
            |.:: ..|......||..||   :.|.:..|              :.|: |:.|..:.       
Zfish   410 SNAV-GSPHAQARRAHSEPT---AATGAFTG--------------RLPV-PDSPPAMS------- 448

  Fly   568 ADNFLTHRECFVCNENTVTTALVPCGHNMFCMECANHICLSMDAVCPVCNSIVYHAMRI 626
                   |:|..|.|:.||.||||||||:||||||..||......||||:::|..|:||
Zfish   449 -------RDCMTCFESKVTAALVPCGHNLFCMECAIRICELNHPECPVCHTLVTQAIRI 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11360NP_001259068.1 KH-I 124..185 CDD:238053 55/60 (92%)
KH 233..298 CDD:197652 47/64 (73%)
zf-C3HC4_3 575..620 CDD:290631 26/44 (59%)
mex3aXP_009290942.1 KH-I 119..179 CDD:238053 54/59 (92%)
KH-I 209..269 CDD:238053 43/59 (73%)
zf-C3HC4_3 451..496 CDD:290631 26/44 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 117 1.000 Domainoid score I5872
eggNOG 1 0.900 - - E1_KOG2113
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 332 1.000 Inparanoid score I2413
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351875at33208
OrthoFinder 1 1.000 - - FOG0001319
OrthoInspector 1 1.000 - - otm25301
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23285
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5311
SonicParanoid 1 1.000 - - X819
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.960

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