DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11360 and mex3d

DIOPT Version :9

Sequence 1:NP_001259068.1 Gene:CG11360 / 43810 FlyBaseID:FBgn0039920 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001116944.1 Gene:mex3d / 100144717 XenbaseID:XB-GENE-493006 Length:439 Species:Xenopus tropicalis


Alignment Length:532 Identity:214/532 - (40%)
Similarity:270/532 - (50%) Gaps:123/532 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 MTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVNKAKREILSA 187
            |||.||||||||||||||||||||||||||||||||||:|||||:|:||||||||..||||||:|
 Frog     1 MTEGVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPIRGEEPIFIVTGRKEDVEMAKREILAA 65

  Fly   188 ADHFSLIRASRKPVSDSQNNGMVGSTTSSGGGAVPRMSGPPCMPGQVTIQVRVPYRVVGLVVGPK 252
            |:|||:|||:|...|     |:.|:|           .|||.:|||.||||||||||||||||||
 Frog    66 AEHFSIIRATRNKAS-----GIPGAT-----------QGPPSLPGQTTIQVRVPYRVVGLVVGPK 114

  Fly   253 GATIKHIQQETQTYIVTPSREKEPIFEVTGLPDNVDTARKQIEAHIALRTGSGSGSGDAITMQSS 317
            |||||.|||.|.||||||||:|||:|||||:|:|||.||::|||||::|||:           ..
 Frog   115 GATIKKIQQSTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHISMRTGA-----------MV 168

  Fly   318 DSVDTKEYASLPSLTQILNDDLNSEILSSIY-KNSVPSTQEYANNSMKTVVNVSNSVKLVQGHHT 381
            |.:...::.|  :.|.:..|.|...  |::: |.|.|  :..::.|....::.|:...|..| .|
 Frog   169 DILPDNDFHS--NGTDVCMDLLGGS--SAMWAKTSAP--RRGSSGSRIETLSSSSGESLYCG-TT 226

  Fly   382 G--NCFQKSEFAEMEMTANITAADILDKRLP----GNEVSVPLAKANVANIVFRTTSSK------ 434
            |  .| |.:.|..|           ||...|    .:.|..||.          |..|:      
 Frog   227 GREQC-QDNPFRPM-----------LDGGFPVAAEPHRVPPPLG----------TEDSEFGFDFL 269

  Fly   435 TLSFCPPTSTSASFHSNCNANILTRSCSSASSTTSTKSTNNSANTPPEILNIWKSISDSIDVDEG 499
            .|....||:..:||..|.........|......:.:.:...|...|...|.:...::..|..|..
 Frog   270 ALDLSTPTAIWSSFEPNGRQLQSFTECPVQRKHSCSGTPRLSPTLPESSLGLEHPLARRIHSDPV 334

  Fly   500 IGDSPSIWNQP---------------ANIIPTAHCSPTISISPTDSLLGMGEHSANQQNLNHAKE 549
            .|.|   |..|               ::.:|.:  |...|.|||||....|:.            
 Frog   335 SGVS---WLPPQGSLSSFSSSTGYSSSSSLPGS--SSAASGSPTDSSSSEGQR------------ 382

  Fly   550 PIMPNLPQKIKGIQVQSNADNFLTHRECFVCNENTVTTALVPCGHNMFCMECANHICLSMDAVCP 614
                      |.:            |:|.||.|:.|..||||||||:||||||..||......||
 Frog   383 ----------KSV------------RDCVVCCESEVIAALVPCGHNLFCMECAIRICERELPECP 425

  Fly   615 VCNSIVYHAMRI 626
            .|::....|:||
 Frog   426 ACHAPATQAIRI 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11360NP_001259068.1 KH-I 124..185 CDD:238053 54/60 (90%)
KH 233..298 CDD:197652 53/64 (83%)
zf-C3HC4_3 575..620 CDD:290631 25/44 (57%)
mex3dNP_001116944.1 KH-I 2..63 CDD:238053 54/60 (90%)
KH 95..160 CDD:197652 53/64 (83%)
zf-C3HC4_3 388..433 CDD:290631 24/44 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351875at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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