DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slip1 and PDZRN4

DIOPT Version :10

Sequence 1:NP_651933.1 Gene:Slip1 / 43809 FlyBaseID:FBgn0024728 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_001158067.1 Gene:PDZRN4 / 29951 HGNCID:30552 Length:1036 Species:Homo sapiens


Alignment Length:819 Identity:194/819 - (23%)
Similarity:339/819 - (41%) Gaps:206/819 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VLKINGYDISHLSRYEAVQKFLQSKETLVVEIRRQKHNALDLELKHGSNAKISKVDNPGELSVLT 76
            ::::||.|:|..:..|||:.|..:||.:||::.|:                 :.:..|.     .
Human   279 IMEVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRR-----------------TPLSRPA-----Y 321

  Fly    77 DKSAEGTITAASASQQINCPSSTSLKEIETKTPVVLTLRARSHEDRLGSLQAASKETQTQSVVGT 141
            ..::|..:..||....|......:|.::...||.|..:......|...||.....|         
Human   322 GMASEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHSLHPMEHE--------- 377

  Fly   142 DVLKDNDLVNTI------TDNFIEHEHHLFEQCLEPEIDIEEVTLVKGVEQSSSNQIGLIVTSSG 200
             ..:||:.::::      |::|                :.|||.|.:   .||..::||.|.   
Human   378 -FYEDNEYISSLPADADRTEDF----------------EYEEVELCR---VSSQEKLGLTVC--- 419

  Fly   201 IQQSSTDTNKGDILGNVLEHSEDVFISGVQPESIAYRDGRLRQGDQILRINGLDVKNQEELETQI 265
               ..||.          |....:::|.|.|.|||.:|||:|:||:||:|||.||:|:||....:
Human   420 ---YRTDD----------EEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALL 471

  Fly   266 ARSSTS-VTLLVSRILYPEDDDDEDIHFEYANTFLPDDYTNVVDKLDKVLLTHVKSLEELSNKSA 329
            :..... :.|||:|   ||...||.        :|.|:....:::|      :::.|||..|::.
Human   472 SNDECKRIVLLVAR---PEIQLDEG--------WLEDERNEFLEEL------NLEMLEEEHNEAM 519

  Fly   330 MQSDECYHIPEK------------NSSDSNVKISSLAKNIIEQSTKSCSKIKLR-----PNANLD 377
            ..:......|:|            :||:::.|.|.:.:.  ::|.::....:..     ||:. .
Human   520 QPTANEVEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRT--DESLRNDESSEQENAAEDPNST-S 581

  Fly   378 YKKKFNLPLSQEEV-HLQYEYDESEHIYETIPEDSESEP------------VYC-----SPYQRS 424
            .|.|.:|..||:.: .::.:|:||....|.|..|....|            :.|     ..|...
Human   582 LKSKRDLGQSQDTLGSVELQYNESLVSGEYIDSDCIGNPDEDCERFRQLLELKCKIRNHGEYDLY 646

  Fly   425 NDKTSIGCSSPIASRPAESLE------RTMQQQTQRVAQWLGLKPQYQKTRQTLVGRPPPLKLVQ 483
            ...::|.|:..........|:      |.::.:.|.:.|...|:                 |:..
Human   647 YSSSTIECNQGEQEGVEHELQLLNEELRNIELECQNIMQAHRLQ-----------------KVTD 694

  Fly   484 QPTCSRVFTLRS---TLTNTSASSSSGVAYSSYGQNNVVTGNAAAPGEEVDNSSSAYNTGDSNNS 545
            |  ...::||..   ...|||.....|..      ::::    ..|.:...:|||||||.:|..|
Human   695 Q--YGDIWTLHDGGFRNYNTSIDMQRGKL------DDIM----EHPEKSDKDSSSAYNTAESCRS 747

  Fly   546 ASPHQNTTNPDEAIATGRKLDSTVIDSPNDHLDATGVSTMLLLPFGKSGRIGLCSSNLPTAYVSE 610
             :|.....:||.::.  |.::.|...:....:.||..|:      |:|.:    .|....|..:|
Human   748 -TPLTVDRSPDSSLP--RVINLTNKKNLRSTMAATQSSS------GQSSK----ESTSTKAKTTE 799

  Fly   611 RYTNVGSENEIHPLKSDIEILRVKPTDDSYS-HCPQFNAPNLSSY----------HFVSSQEVAN 664
            :..:..|:.::      :|..::...:.:.| |.|..:..:.|||          |:.|..::..
Human   800 QGCSAESKEKV------LEGSKLPDQEKAVSEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQ 858

  Fly   665 RCHISTSLQKNATLLN----GESAEEIPMVWKVKRRPDGTRYIVKRPVRNRPQVALRKNMRYNEV 725
            :.......|...:|::    .:...|..|.||||.|.||||||.|||||:|  :...:.::..|.
Human   859 QKSAVEYAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDR--ILKERALKIKEE 921

  Fly   726 ---TTTEDDTISEVKIGRYWTKEERKRHIERAREKRHHQ 761
               .||:|||:||:|:||||:|||||:|:.||:|:|..:
Human   922 RSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRR 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slip1NP_651933.1 PDZ_canonical <11..45 CDD:483948 12/32 (38%)
PDZ_canonical 173..279 CDD:483948 37/106 (35%)
PDZRN4NP_001158067.1 RING-HC_LNX4 12..64 CDD:438379
PDZ1-PDZRN4-like 221..312 CDD:467199 12/32 (38%)
PDZ2-PDZRN4-like 398..486 CDD:467200 39/125 (31%)
Blue background indicates that the domain is not in the aligned region.

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