Sequence 1: | NP_726596.1 | Gene: | gw / 43808 | FlyBaseID: | FBgn0051992 | Length: | 1384 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011240059.1 | Gene: | Tnrc6a / 233833 | MGIID: | 2385292 | Length: | 1954 | Species: | Mus musculus |
Alignment Length: | 1456 | Identity: | 393/1456 - (26%) |
---|---|---|---|
Similarity: | 569/1456 - (39%) | Gaps: | 403/1456 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 LFSQDGWGCQHVNQDTNWEVPSSPEPANKDAPGPPMWKPS----INNG--TDLWESNLRNGGQPA 63
Fly 64 AQQVPKPS--WGHTPSSNLGGTWGEDDDGADSSSVWTGGAVSNAGSGAAVGVNQAGVNVGPGGVV 126
Fly 127 SSGGPQWG----------------QGVVGVGLGSTGGNGSSNITGSSGVATGSSGNSSNAGNGWG 175
Fly 176 DPREIRPLGVGGSMDIRNVEHRGGNGSGATSSDPRDIRMIDPRDPIRGDPRGISGRLNGTSEMWG 240
Fly 241 HHPQMSHNQLQGINKMVGQSVATASTSVGTS-----------GS-GIGPG---GPGPSTVSGNIP 290
Fly 291 TQWGPAQPVSVGVSGPKDMSKQISGWEEPSPPPQRRSIPNYDDGTSLWGQQTR------------ 343
Fly 344 VPAASGHWKDMTDSIGRSSHLMRGQSQTGGIGIAGVGNSNVPVG-------ANPSNPISSVVGPQ 401
Fly 402 ARIPSVGGVQHKPDGGAMW---VHSGNVGGRNNVAA--VTTWGDDTHSVNVGAPSSGSVSSNNWV 461
Fly 462 DDKSNSTLAQNSW-SDPAPVGVSWGNKQSKPPSNSASSGWSTAAGVVDGVDLGSEWNTHG----- 520
Fly 521 ---------------GIIGKSQQQQKLAGLNVGMVNVINAEIIKQSKQYRILVENGFKKEDVERA 570
Fly 571 LVIANMNIEEAADMLRANSSLSMDGWRRHDESLGSYADHNSSTSSGGFAGRYPVNSGQPSMSFPH 635
Fly 636 NNLMNNMGGTAVTGGNNNTNMTALQVQKYLNQGQHGVAVGPQAVGNSSAVSVGFG-QNTSNAAVA 699
Fly 700 GAASVNIAANTNNQPSGQQ-------------IR------MLGQQIQLAI-----HSGFISSQIL 740
Fly 741 TQPLTQTTLNLLNQL--LSNIKHLQ--AAQQSLTRGGNVNPMAVNVAISKYKQQIQNLQNQ-INA 800
Fly 801 QQAVYVKQQNMQPT---SQQQQPQQQQL--PSVH------LSNSGNDYLRGHDAINNLQSNF--- 851
Fly 852 --SELNINKPSGYQGASNQQSRLNQWKLPVLDKEINSDSTEFSRAPGATKQNLTANTSNINSLGL 914
Fly 915 QNDST--WSTGRSIGDGWPDPSSDNENKDWSVAQPTSAATAYTDLVQEFEPGKPWKGSQIKSIED 977
Fly 978 DPSITPGSVARSPLSINSTPKDADIF--ANTGKNSP--TDLPPLSLSSSTWSF--NPNQNYPSHS 1036
Fly 1037 ---------------WSDNSQQCTATS-ELWTSPL---NKSSSRGPPPGLTANSNKSANSNASTP 1082
Fly 1083 TTITGGANGWLQPRSGGVQTTNTNWTGGNTTWGSS-------WLLLKNLTAQIDGPTLRTLCMQH 1140
Fly 1141 GPLVSFHPYLNQGIALCKYTTREEANKAQMALNNCVLANTTIFAESPSENEVQSIM-QHLPQTPS 1204
Fly 1205 -STSSSGTSGGNVGGVG-----TSANNANSGSAACLSGNNSGNGNGSA----------------- 1246
Fly 1247 --SGAGSGNNGNSSCNNSAAGGGSSS 1270 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
gw | NP_726596.1 | Ago_hook | 388..520 | CDD:287408 | 34/137 (25%) |
UBA_GAWKY | 551..585 | CDD:270470 | 5/33 (15%) | ||
M_domain | 613..848 | CDD:289690 | 63/275 (23%) | ||
TNRC6-PABC_bdg | 844..1068 | CDD:293214 | 86/255 (34%) | ||
RRM_GW182_like | 1116..1185 | CDD:240881 | 44/75 (59%) | ||
Tnrc6a | XP_011240059.1 | Ago_hook | 1069..1194 | CDD:371044 | 34/157 (22%) |
M_domain | 1289..1474 | CDD:372400 | 49/199 (25%) | ||
TNRC6-PABC_bdg | 1497..1760 | CDD:374665 | 92/297 (31%) | ||
RRM_TNRC6A | 1773..1855 | CDD:241155 | 48/81 (59%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 286 | 1.000 | Inparanoid score | I2823 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001648 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR13020 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R11465 |
SonicParanoid | 1 | 1.000 | - | - | X744 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
7 | 7.140 |