Sequence 1: | NP_726596.1 | Gene: | gw / 43808 | FlyBaseID: | FBgn0051992 | Length: | 1384 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_030101765.1 | Gene: | Tnrc6c / 217351 | MGIID: | 2443265 | Length: | 1936 | Species: | Mus musculus |
Alignment Length: | 1416 | Identity: | 392/1416 - (27%) |
---|---|---|---|
Similarity: | 546/1416 - (38%) | Gaps: | 396/1416 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 LFSQDGWGCQHVNQDTNWEVPSSPEPANKDAPGPPMW-----KPSINNG-TDLWESNLRN----- 58
Fly 59 ---GGQPAAQQVP-KPSWGHT----PSSNLGGTWGEDDDGADSSSVWTGGAVSNAGSGAAVGVNQ 115
Fly 116 AGVNVGPGGVVSSGGPQWGQGVVGVGLGSTGGN---GSSNITGSSG----VATGSSGNSSNAGNG 173
Fly 174 WGDPREIRPLGVGGSMDIRNVEHRGGNGSGATSSDPRDIRMIDPRDPIRGDPRGISGRLNGTSEM 238
Fly 239 WGHHPQMSHNQLQGINKMVGQSVATASTSVGTSGSGIGPGGPGPSTVSGNIPTQWGPAQPVSVGV 303
Fly 304 SGPKDMSKQISGWEEPSPPPQRRSIPNYDDGTSLWGQQTRVPAASGHWKDMTDSIGRSSHLMRGQ 368
Fly 369 SQTGGIGIAGVGNSNVPVGANPSNPISSVVGPQARIP--SVGGVQ--HKPDGGAMWVHSGNVGGR 429
Fly 430 NNVAAVTTWGDDTHSVNVGAPSSGSVSSNNWVDDKSNSTLAQN---SWSDPAPVGVSWGNKQS-- 489
Fly 490 ----------------KPPSNSASSGWSTAAGVVDGVDLG-SEWNTHGGIIGKSQQQQKLA---- 533
Fly 534 --------GLNVGMVNV-------INAEIIKQSKQYRILVENGFKKEDVERALVIANMNIEEAAD 583
Fly 584 MLRANSSLSMDGWRRHDESLGSYADHNS-------------------------------STSSGG 617
Fly 618 FAGRYPVNS---GQPSMSFPHNNL---MNNMGGTAVTGGNNNTNMTALQVQKYLNQGQHGVAVGP 676
Fly 677 QAVGNSSAVSVGFGQNTSNAAVAGAASVNIAANTNNQPSGQQI-----------------RMLGQ 724
Fly 725 QIQLAIHSGFISSQILTQPLT---QTTLNLLNQLLSNIKHLQAAQQSLTRGGNVN-PM-----AV 780
Fly 781 NVAISKYKQQIQNLQNQINAQQAVYVKQQ---------NMQPTSQQQ-------QPQQQQLPSVH 829
Fly 830 L---SNSGNDYLRGHDAINNLQSNFSELNINKPSGYQGASNQQSRLNQWKLPVLDKEINSDSTEF 891
Fly 892 SRAP---GATKQNLTANTSNINSLG--------LQN-DSTWSTGRSIGDGWPDPSSDNE--NKDW 942
Fly 943 SVAQPTSAATAYTDLVQEFEPGKPWKGSQIKSIEDDPSITPGSVARSPLSINSTPKDAD--IFAN 1005
Fly 1006 TGKNSPTDLPPLSLSSSTWSFNPNQNYPSHSWSDNSQQCTATSELWTSPLNKSSSRGPPPGLTAN 1070
Fly 1071 SNKSANSNASTPTTITGGAN--GWLQPRSGGVQTTNTNW---TGGNTTWGSSWLLLKNLTAQIDG 1130
Fly 1131 PTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQMALNNCVLANTTIFAESPSENEVQSI 1195
Fly 1196 M---QHLPQTPSSTSSSGTSGGNVGGVGTSANNANSGSA----ACLSGNNS 1239 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
gw | NP_726596.1 | Ago_hook | 388..520 | CDD:287408 | 41/157 (26%) |
UBA_GAWKY | 551..585 | CDD:270470 | 10/33 (30%) | ||
M_domain | 613..848 | CDD:289690 | 72/285 (25%) | ||
TNRC6-PABC_bdg | 844..1068 | CDD:293214 | 68/239 (28%) | ||
RRM_GW182_like | 1116..1185 | CDD:240881 | 44/68 (65%) | ||
Tnrc6c | XP_030101765.1 | Ago_hook | 1070..1185 | CDD:371044 | 24/117 (21%) |
UBA_TNR6C | 1182..1219 | CDD:270469 | 14/43 (33%) | ||
M_domain | 1270..1460 | CDD:372400 | 61/224 (27%) | ||
TNRC6-PABC_bdg | 1504..1758 | CDD:374665 | 84/299 (28%) | ||
RRM_TNRC6C | 1759..1841 | CDD:241157 | 49/81 (60%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_28PT5 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 286 | 1.000 | Inparanoid score | I2823 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001648 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR13020 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R11465 |
SonicParanoid | 1 | 1.000 | - | - | X744 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
9 | 8.950 |