Sequence 1: | NP_726596.1 | Gene: | gw / 43808 | FlyBaseID: | FBgn0051992 | Length: | 1384 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009300640.2 | Gene: | tnrc6c2 / 100149391 | ZFINID: | ZDB-GENE-061207-48 | Length: | 1571 | Species: | Danio rerio |
Alignment Length: | 1441 | Identity: | 377/1441 - (26%) |
---|---|---|---|
Similarity: | 544/1441 - (37%) | Gaps: | 421/1441 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 GWGCQHVNQDTNWEVP---------------SSPEPANKDAPGPPMWKPSINNGTDLWESNLRNG 59
Fly 60 GQPAAQQVPKPSWGH---TPSSNLGGT----------WGEDDDGADSSSVWTGGAVSNAGSGAAV 111
Fly 112 GVNQAGVNVGPGGVVSSGGPQWGQGVVGVGLGSTG-GNGSSNITGSSGVATGSSGNSSNAGNGWG 175
Fly 176 DPREIRPLGVGGSMDIRNVEHRGGNGSGATSSDPRDIRMIDPR------DPIRGDPRGISGRLNG 234
Fly 235 TSEMWGHHPQMSHNQLQGINKMVGQSVATASTSVGTSGSGIGPGGPGPSTVSGNIPTQWGPAQPV 299
Fly 300 SVGVSG-----PKDMSKQISGWEEPSPPPQRRSIPNYDDGTSLWGQQTRVPAASGHWKDMTDSIG 359
Fly 360 RSSHLMRGQSQT-GGIGIAGVGNS-NVPVGANPSNPISSVVGPQARIPSVGGVQHKPDGGAMWVH 422
Fly 423 SGNVGGRNNVAAVTT--------------WGD------DTHSVNVGAPSSGSVSSNNWVDDKSNS 467
Fly 468 TLAQNSWSD------------------------PAPVGVSWGNKQSKPPSNSASSGWSTAAGVVD 508
Fly 509 GVDLGSEWNT---------HGGIIGKSQQQQKLAGL--NVGMVNVINAEIIKQSKQYRILVENGF 562
Fly 563 KKEDVERALVIANMNIEEA-ADMLRANSSLSMDGWRRHDESLG---------------SYADH-- 609
Fly 610 --------NSSTSSGGFAGRYPVNSGQPSMSFPHNNLMNNMGGTAVTGGNNNTNMTALQVQKYLN 666
Fly 667 QGQH-GVAVGPQAVGNSSAVSVGFGQNTSNAAVAGAASVNIAAN------------TNNQPS--G 716
Fly 717 QQIRML-----GQQIQLAIHSGFISSQILTQPLT---QTTLNLLNQLLSNIKHLQAAQQSLTRGG 773
Fly 774 NVN------PMAVNVAISKYKQQIQNLQNQINAQQAVYVKQQNMQPTSQQQQPQQQQLPSVHLSN 832
Fly 833 SGNDYLRGHDAIN-NLQSNFSE---LNINKPSGYQGASNQQSRLNQWKLPVLDKEINS-DSTEFS 892
Fly 893 RAPGATKQNLTANTSNINSLGLQNDSTWSTGRSIGDGWP--DPSSDNENKDWSVAQPTS------ 949
Fly 950 -----AATAYTDLVQEFEPGKPWKGSQIKSIEDDPSITPGSVARSPLSINSTPKDADIFA---NT 1006
Fly 1007 GKNSPTDLPPLSLSSSTWS---------FNPNQNYPSH---------SWSD---NSQQCTATSEL 1050
Fly 1051 W-TSP--LNKSSSRGPPPGLTANSNKSANSNASTPTTITGGANGWLQPRSGGVQTTNTNWTGGNT 1112
Fly 1113 TWGSSWLLLKNLTAQIDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQMALNNCVL 1177
Fly 1178 ANTTIFAESPSENEVQSIM---QHLPQT------PSSTSSSGTSGGNVGGVGTSANNANSGSAAC 1233
Fly 1234 LSGNNSGNGNG 1244 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
gw | NP_726596.1 | Ago_hook | 388..520 | CDD:287408 | 32/184 (17%) |
UBA_GAWKY | 551..585 | CDD:270470 | 11/34 (32%) | ||
M_domain | 613..848 | CDD:289690 | 61/264 (23%) | ||
TNRC6-PABC_bdg | 844..1068 | CDD:293214 | 77/268 (29%) | ||
RRM_GW182_like | 1116..1185 | CDD:240881 | 45/68 (66%) | ||
tnrc6c2 | XP_009300640.2 | UBA_TNR6C | 800..837 | CDD:270469 | 16/46 (35%) |
M_domain | 880..1097 | CDD:315593 | 59/262 (23%) | ||
TNRC6-PABC_bdg | 1098..1387 | CDD:318749 | 85/319 (27%) | ||
RRM_TNRC6C | 1388..1470 | CDD:241157 | 50/81 (62%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 292 | 1.000 | Inparanoid score | I2766 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001648 | |
OrthoInspector | 1 | 1.000 | - | - | otm24990 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR13020 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X744 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.150 |