DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ekar and Ir7d

DIOPT Version :9

Sequence 1:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001138175.1 Gene:Ir7d / 7354416 FlyBaseID:FBgn0259190 Length:594 Species:Drosophila melanogaster


Alignment Length:787 Identity:139/787 - (17%)
Similarity:244/787 - (31%) Gaps:277/787 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 VCKLIRVGVQAVFSP----TDSVLATHINSICDALDIPNIGRSAHDFSINVYPSKQ--------L 132
            :||     ||||..|    .:..||:.|::....:.|.  |.:.::|.:.:..|.:        |
  Fly    13 LCK-----VQAVVWPHQHLLEEQLASQISATLQKIFIN--GLAVYNFGVFISTSYEEMDRDRVIL 70

  Fly   133 VNYAFNDVIQYLNWTRFGILHEKENGIINLHQLSRSFHGEVHMRQVSRDSYVSALNEFKGKEIHN 197
            |:...|..:...|:....:|..|.|                  |:::...:...|.....::...
  Fly    71 VHQVLNRNLYPPNFPVAVVLASKMN------------------RKITAQVFTQLLFVQNAEQAIA 117

  Fly   198 IIIDTNSNGISILLKNILQQQMNEYKYHYLFTSFDLETYDL------------EDFKYNFVNITS 250
            |....|.||:.:::  :|..|........:||.|..|.|::            :.|.......||
  Fly   118 IAEGVNRNGLCVIV--LLTSQPERPIMTKIFTYFMQERYNINVVILVPRLHGVQAFNVRPYTPTS 180

  Fly   251 FRLVDTADVGVKQILKDIGLYSHHIFKKPYLNLH-IKKSTILESEPALMFDSVYVFAIGLQTLEQ 314
            ...::..::.:    ||..|:.  :|.:...||| ...|.|:                       
  Fly   181 CSSLEPVEIDI----KDGDLWD--VFPRRLKNLHGCPLSVIV----------------------- 216

  Fly   315 SHSLTLLNISCEEENSWDGGLSLINYLNAVEWKGLTGPIQFKDGQRVQFKLDLIKLKQHSIVKVG 379
                            ||    :..|:. :.||. :.|:...||      ||.:.|:   ||   
  Fly   217 ----------------WD----IPPYMR-INWKS-SDPMDGLDG------LDGLLLR---IV--- 247

  Fly   380 EWTPHGHLNITEPSMFFDAGSMNVTLVVITILETPYVMMHYGKNFTGNERFYGFCVDILETISRE 444
                              |..||.||.:|.                 ||                
  Fly   248 ------------------ARKMNFTLKLIP-----------------NE---------------- 261

  Fly   445 VGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMKYKADLAVGSMTITYARESVIDFTKPFMNLGI 509
                      |:...|......|.:.|....|.:.:|::.:|....|..|.:.::.|.|:..:. 
  Fly   262 ----------PNGLIGGSSFMNGTFTGAYKMLRERRANITIGCAACTPERSTFLEATSPYSQMS- 315

  Fly   510 SILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGKLSPIE---WKCINACDLENI 571
                                       |:::........||.| .|.|.|   |..::       
  Fly   316 ---------------------------YIIVLQARGGYSIYEV-MLFPFEKYTWLLLS------- 345

  Fly   572 SIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMI 636
                  ::....|.....:...||           |.:.|..:..:|.|||.|:         :.
  Fly   346 ------TILGLHWIVGSRWRMPSP-----------ILAGWMLWIFVIRASYEAS---------VF 384

  Fly   637 NPIENAEDLASQTEISYGTLD---SGSTMTFFRDSVIETYKKIWRSMDNKKPSAFTTT------- 691
            |.|:|     |..:.|..|||   ||. ..|..|..  :|:     |..|.||....|       
  Fly   385 NFIQN-----SPVKPSPRTLDQALSGG-FRFITDHA--SYR-----MTLKIPSFQGKTLISAGQP 436

  Fly   692 --YEDGIKRVNQGNYAFLMESTMLDYIVQRDCNLTQIGGLLD---TKGYGIATPKGSPWRDKISL 751
              ..|.:.:......||...:.:.|::|:...:..|:..|.:   .....:..|.||.:..:|:.
  Fly   437 VDVFDALLKAPWKTGAFTSRAFLADHLVRHRKHRNQLVILAEKIVDNMLCMYFPHGSYFAWEINK 501

  Fly   752 AILELQERGDIQ-----MLYDKWWKNTDETCTRKNTSKQSKANSLGL-ESIGGVFVVL--IAGII 808
            .:..::..|..|     :.:|.....||.....|.....:::.:.|. ||:..|...|  :.|.:
  Fly   502 LLFNMRSFGIFQHHSQILAWDNLPTTTDTDTPGKRIHSSTESVATGFAESMSFVVAALNCLMGAL 566

  Fly   809 VAAVVAF 815
            ..::|.|
  Fly   567 CISIVVF 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 59/332 (18%)
ANF_receptor 39..371 CDD:279440 56/315 (18%)
PBP2_iGluR_Kainate 402..771 CDD:270432 67/391 (17%)
Lig_chan 533..807 CDD:278489 58/299 (19%)
Ir7dNP_001138175.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463104
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

Return to query results.
Submit another query.