DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ekar and Ir94d

DIOPT Version :9

Sequence 1:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster


Alignment Length:727 Identity:137/727 - (18%)
Similarity:257/727 - (35%) Gaps:191/727 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 GILHEKENGIINLHQLSRSFHGEV--HMRQVSRDSYVSALNEFKGKEIHNIIIDTNSNGISILLK 212
            |.||.....::.|.....||:..:  |:.:..:..||..|..|            ::..:.||.:
  Fly     2 GQLHLLLVALVLLSPGGDSFYHSLIHHLNRELKIEYVLLLGNF------------DTTWLDILWQ 54

  Fly   213 NILQQQMNEYKYHYLFTSFDLETYD-LEDFKYNFVNITSFRLVDTADVGVKQILKDIGLYSHHIF 276
              |...:.:.|.|      ..|||. ||:..:|.:.|.   .|:.:...:.:||           
  Fly    55 --LPVSVLQIKEH------SRETYSLLENPSHNVLTIA---FVNDSPEDILEIL----------- 97

  Fly   277 KKPYLNLHIKKSTILESEPALMF---DSVYVFAIGLQTLEQSHSLTLLNISCEEENSWDGGLSLI 338
               |.||.     :|.::|.|:.   .::.|.::    ||......||.:....::..:   |||
  Fly    98 ---YRNLR-----MLNTQPVLLVIRKSTIRVNSL----LEWCWHHQLLKVVAIAQDFME---SLI 147

  Fly   339 NY-------LNAVEWKGLTGPIQFKDGQRVQFKLDLIKLKQHSIVKVGEWTPHGHLNITEPSMFF 396
            .|       |..:|.:        .|...|.|:..|..|             ||:      .:..
  Fly   148 VYSYNPFPVLQFIERR--------LDNSTVIFEKRLENL-------------HGY------EVPI 185

  Fly   397 DAGSMNVTLVVITILETPYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGA 461
            ..|..:..|:|...||             |...|.|...:.:::..:.    |...||  :.|..
  Fly   186 ALGGSSPRLIVYRDLE-------------GKLIFSGPVGNFMKSFEQR----YNCRLV--QPYPF 231

  Fly   462 KDPETGEWNGMVAQLMKYKADLAVGSMTITYARESVIDFTKPFMNLGISILFKVPTSEP-TRLFS 525
            .:........::|.:......:|:|::   |.:.....::.|...:...::..||...| ::|:|
  Fly   232 DESAISPARDLIASVQNGSVQIALGAI---YPQVPYTGYSYPIELMSWCLMMPVPEEVPHSQLYS 293

  Fly   526 FM-NPLAIEIWIYVLIAYFL-VSLCIYIVG-KLSPIEWKCINACDLENISIGNQFSLTDSFWFTI 587
            .: :|:|..|.|..::...| :|:.:.:.| ::|..|:...::| |..:       |:.||:..:
  Fly   294 MVFSPMAFGITIVAMVLISLTLSMALRLHGYRVSFSEYFLHDSC-LRGV-------LSQSFYEVL 350

  Fly   588 GTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIENAEDLASQTEIS 652
                 ::|.:. :||...|.     ...|:|.:.|.:..:.|:|:......:.:.|.: ..:.|.
  Fly   351 -----RAPALI-KAMYLVIC-----LLGLLITSWYNSYFSTFVTSAPRFPQLTSYESI-RHSNIK 403

  Fly   653 YGTLDSGSTMTFFRDSVIETYKKIWRSMDNKKP-----SAFTTTYEDGIKRVNQGNYAFLMESTM 712
            .........|..|....:|.|..|::..::.|.     .:|.|.|          .|...||...
  Fly   404 IVIWKPEYEMLLFFSENMEKYSSIFQLQEDYKEFLHLRDSFDTRY----------GYMMPMEKWS 458

  Fly   713 LDYIVQRDCNLTQIGGLLDTKGYGIATP------KGSPWRDKISLAILELQERGDIQMLYDKWWK 771
            |....||..: :.:..|.|........|      |.|.:::.....||::...|    |..:|  
  Fly   459 LMKEQQRVFS-SPLFSLQDDLCVFHTVPIVFPMVKNSIFKEPFDRLILDVTATG----LLSRW-- 516

  Fly   772 NTDETCTRKNTSKQSKANSLGLESIG--------------------GVFVVLIAGIIVAAVVAFF 816
             .|.:.|     :..||..||||..|                    |..:.|...:.:..::.|:
  Fly   517 -RDMSFT-----EMIKAGQLGLEDRGHPKEFRAMKVGDLIQIWRFVGWMLGLATIVFLLELICFW 575

  Fly   817 --EFWYNFRYNY 826
              :.|.|.:|.:
  Fly   576 RHKMWQNMKYMF 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 50/250 (20%)
ANF_receptor 39..371 CDD:279440 47/233 (20%)
PBP2_iGluR_Kainate 402..771 CDD:270432 71/383 (19%)
Lig_chan 533..807 CDD:278489 59/306 (19%)
Ir94dNP_001138099.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463122
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.