DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ekar and Ir93a

DIOPT Version :9

Sequence 1:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_650924.3 Gene:Ir93a / 42471 FlyBaseID:FBgn0259215 Length:868 Species:Drosophila melanogaster


Alignment Length:778 Identity:151/778 - (19%)
Similarity:285/778 - (36%) Gaps:210/778 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 GKEIHNIIIDTNSNGI------------------SILLKNILQQQMNEYKYHYLFTSFDLETYDL 238
            |.|...:|:|.....|                  ::|:|:|:.:.:..:     .|...|..|::
  Fly   145 GDEFPQLILDAKVQQILNWKTAVVFVDQTILEENALLVKSIVHESITNH-----ITPISLILYEI 204

  Fly   239 EDFKYNFVNITSFRLVDTADVGVKQILKDIGLYSHHIFKKPYLNLHIKKSTILE-SEPALMFD-- 300
            .|         |.| .....|.::|.|.......|...::.:|.:......|:| :|...||.  
  Fly   205 ND---------SLR-GQQKRVALRQALSQFAPKKHEEMRQQFLVISAFHEDIIEIAETLNMFHVG 259

  Fly   301 ---SVYV-------FAIGLQTLEQSH--------------------------SLTLLN----ISC 325
               .::|       |..|..|:....                          ||.|:|    |:.
  Fly   260 NQWMIFVLDMVARDFDAGTVTINLDEGANIAFALNETDPNCQDSLNCTISEISLALVNAISKITV 324

  Fly   326 EEENSWDGGLSLINYLNAVEWKGLTGPIQFKDGQRVQFKLDLIKL-------------------- 370
            |||       |:...::..||:.:....|.|..:.:::..:.:|.                    
  Fly   325 EEE-------SIYGEISDEEWEAIRFTKQEKQAEILEYMKEFLKTNAKCSSCARWRVETAITWGK 382

  Fly   371 -----------------KQHSIVKVGEWTPHGHLNITEPSMFF---DAGSMNVTLVVITILETPY 415
                             :....:.:|.|||  .|......:.|   :....|:|:.::|:...|:
  Fly   383 SQENRKFRSTPQRDAKNRNFEFINIGYWTP--VLGFVCQELAFPHIEHHFRNITMDILTVHNPPW 445

  Fly   416 VMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEW---NGMVAQLM 477
            .::....|....|. .|..::|::.:||.:.|.|.|.            |...|   :.:.....
  Fly   446 QILTKNSNGVIVEH-KGIVMEIVKELSRALNFSYYLH------------EASAWKEEDSLSTSAG 497

  Fly   478 KYKADLAVGSMT--ITYARESVI----------------------DFTKPFMNLGISILFKVPTS 518
            ..::|..|||||  |.|....::                      ::|:|......|.:.:.| .
  Fly   498 GNESDELVGSMTFRIPYRVVEMVQGNQFFIAAVAATVEDPDQKPFNYTQPISVQKYSFITRKP-D 561

  Fly   519 EPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGKLSPIEWKCINACDLENISIGNQFSLTDSF 583
            |.:|::.|..|..:|.|..::....|.:..:|.:.:|:|          |:.:.|....::...|
  Fly   562 EVSRIYLFTAPFTVETWFCLMGIILLTAPTLYAINRLAP----------LKEMRIVGLSTVKSCF 616

  Fly   584 WFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERM------INPIENA 642
            |:..|..:||.....|.|.|.|::...|....:::|.:|..||.||||..:.      :|.:|:.
  Fly   617 WYIFGALLQQGGMYLPTADSGRLVVGFWWIVVIVLVTTYCGNLVAFLTFPKFQPGVDYLNQLEDH 681

  Fly   643 EDLASQTEISYGTLDSGSTMTFFRDSVIETYKKIWRSMDNKKPSAFTTTYEDGIKRVNQGNYAFL 707
            :|:     :.|| |.:|   |||...|..|.::.::.. .::...:.:..|:.|:.|.:|....:
  Fly   682 KDI-----VQYG-LRNG---TFFERYVQSTTREDFKHY-LERAKIYGSAQEEDIEAVKRGERINI 736

  Fly   708 MESTMLDYIVQR------DCNLTQIG--GLLDTKGYGIATPKGSPWRDKISLAILELQERGDIQM 764
            .....|..||||      :|:.. :|  ..:|.: ..:..|..|.:...::..|..:...|.|  
  Fly   737 DWRINLQLIVQRHFEREKECHFA-LGRESFVDEQ-IAMIVPAQSAYLHLVNRHIKSMFRMGFI-- 797

  Fly   765 LYDKWWK-NTDET--CTRKNTSKQSKANSLGLESIGGVFVVLIAGIIVAAVVAFFEFWY-NFR 823
              ::|.: |....  |..|:..:|...:.:.::.:.|.|:||:.|..:|.::...|||| .||
  Fly   798 --ERWHQMNLPSAGKCNGKSAQRQVTNHKVNMDDMQGCFLVLLLGFTLALLIVCGEFWYRRFR 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 46/293 (16%)
ANF_receptor 39..371 CDD:279440 42/276 (15%)
PBP2_iGluR_Kainate 402..771 CDD:270432 87/409 (21%)
Lig_chan 533..807 CDD:278489 64/290 (22%)
Ir93aNP_650924.3 Periplasmic_Binding_Protein_Type_2 429..>697 CDD:328725 67/300 (22%)
Lig_chan 576..836 CDD:306551 62/285 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462924
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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