DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ekar and Ir92a

DIOPT Version :9

Sequence 1:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster


Alignment Length:759 Identity:140/759 - (18%)
Similarity:263/759 - (34%) Gaps:216/759 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 VHMRQVSRDSYVSALNEFKGKEIHNIIIDTNSNGISIL-------LKNILQQQMNEYKYHYLFTS 230
            :|:.|:.|........||..    .:|:..||...:.|       |:.:|::.....:..::..:
  Fly     8 MHLSQLLRIIVGQYFAEFPS----ILIVYNNSASTTPLQLEYLSALELVLRELSKPIRLQWINVA 68

  Fly   231 FDLETYDLEDFKYNFVNITSFRLVDTADVGVKQILKDIGLYSHHIFKKPY-----LNLHIKKSTI 290
            |..:..||||.....:|       .:...|...||..    :||.....|     .|:.:|....
  Fly    69 FLKDLNDLEDQVMGALN-------SSVTEGFITILSQ----THHFIHARYYATRNANVRLKDKRY 122

  Fly   291 L----ESEPA--LMFDSVYVFAIGLQTLEQSHSLTL--------------LNISCEEENSWDGGL 335
            |    :..||  |..|.:..:...|.....:.:...              .::|.:.::..:||.
  Fly   123 LFLCEDESPAELLCMDILQFYPHHLMVRPGTETAPTGPTGPHPDPRRGGGASVSTKNKDDGEGGA 187

  Fly   336 SLINYLNAVEWKGLTGPIQFKDGQRVQFKLDLIKLKQHSIVKVGEWTPH-----GHLNITEPSMF 395
            .          ...|.|  ::|   :.|:|               ||..     |:|:    ::.
  Fly   188 G----------NKTTSP--YRD---INFEL---------------WTQKFVGAVGNLD----ALL 218

  Fly   396 FDAGSMNVT-------------------LVVITILETPYVMMHY----------------GKNFT 425
            .||...|.|                   |:|.:|...||.:.:|                .::.|
  Fly   219 LDAFLPNETFANRVELYPNKLLNLQRRSLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRSLT 283

  Fly   426 GNERFYGFCVDILETISREVGFDYILDLVPDRKYGAK------DPETGEWNGMVAQLMKYKADLA 484
                |.|...::::|..:.......::     .|||.      |.|:.:  ||:..:.:.:.::|
  Fly   284 ----FDGAEANVMKTFCQVHNCHLRVE-----AYGADNWGGIYDNESSD--GMLGDIYEQRVEMA 337

  Fly   485 VGSMTITYARESVIDFTKPFMNLGISILFKVPTSEP---TRLFSFMNPLAIEIWIYVLIAYFLVS 546
            :|.:...|  :.:.:.:.......::||...|...|   |.:..|.|    ..|:.::....:..
  Fly   338 IGCIYNWY--DGITETSHTIARSSVTILGPAPAPLPSWRTNIMPFNN----RAWLVLISTLVICG 396

  Fly   547 LCIYIVG------KLSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFMQQ-----SPDIY-P 599
            ..:|.:.      :.|..:.|..::..||.       |:.|.|    ..|:||     |.|.: |
  Fly   397 TFLYFMKYVSYRLRYSGTQVKFHHSRKLEK-------SMLDIF----ALFIQQPSAPLSFDRFAP 450

  Fly   600 RAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGSTMTF 664
            |.....|:.:|     :.:...|:..|.:.||......|::..|..|..     |...|..::.:
  Fly   451 RFFLATILCAT-----ITLENIYSGQLKSMLTFPFYSAPVDTIEKWAQS-----GWKWSAPSIIW 505

  Fly   665 ---FRDSVIETYKKIWRSMDNKKPS-----AFTTTYEDGIKRVNQGNYA---FLMESTMLDYIVQ 718
               .:.|.:||.:.:.|:.:....|     :|...|..||:|::.|:.:   ::....:.:.||.
  Fly   506 VHTVQSSDLETEQILARNFEVHDYSYLSNVSFMPNYGFGIERLSSGSLSVGDYVSTEALENRIVL 570

  Fly   719 RDCNLTQIGGLLDTKGYGIATPKGSPWRDKISLAILELQERGDIQMLYDKW-WKNTDETCTRK-- 780
            .|.........:..:|: |..|       :::..|...||.|    ||..| .:..|:...:|  
  Fly   571 HDDLYFDYTRAVSIRGW-ILMP-------ELNKHIRTCQETG----LYFHWELEFIDKYMDKKKQ 623

  Fly   781 -------NTSKQSKA-NSLGLESIGGVFVVLIAGIIVA--AVVA 814
                   |..|...| .:|.:.:|.|...||..|:..|  |:||
  Fly   624 EVLMDLANGHKVKGAPQALDVRNIAGALFVLAFGVAFAGCALVA 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 42/251 (17%)
ANF_receptor 39..371 CDD:279440 39/229 (17%)
PBP2_iGluR_Kainate 402..771 CDD:270432 80/436 (18%)
Lig_chan 533..807 CDD:278489 61/307 (20%)
Ir92aNP_001097845.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463073
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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