DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ekar and Ir76a

DIOPT Version :9

Sequence 1:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster


Alignment Length:526 Identity:119/526 - (22%)
Similarity:206/526 - (39%) Gaps:94/526 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 YLNA----VEWKGLTGPIQF-KDGQRVQF----KLDLIKLKQHSIVKVGEWTPHGHLNITEPSMF 395
            |||:    ::.....||..| |:.:.|:|    :.|....|       ..|.       |:.:|.
  Fly   165 YLNSSTFEIKTNRFVGPRNFNKNPEPVEFYILQRFDAKGTK-------ATWE-------TQSAMS 215

  Fly   396 FDAGSMNVTLVVITILE-TPYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKY 459
            ....::....|||.|.: .|::::.|.|.....:||.. ..|:  ||.   |.|..|.|:....|
  Fly   216 SKMRNLKGREVVIGIFDYKPFMLLDYEKPPLYYDRFMN-TTDV--TID---GTDIQLMLIFCELY 274

  Fly   460 G----AKDPETGEWN---------GMVAQLMKYKADLAVGSMTITYARESVIDFTKPFMNLGISI 511
            .    ....|..:|.         |:|..::..:.|..||.|.:.|.....:|.|......|::.
  Fly   275 NCTIQVDTSEPYDWGDIYLNASGYGLVGMILDRRNDYGVGGMYLWYEAYEYMDMTHFLGRSGVTC 339

  Fly   512 LFKVPTSEPTRLFSF---MNPLAIEIWIYVLIAYFLVSLCIYIVGKLSPIEWKCINACDLENISI 573
            |  ||.  |.||.|:   :.|....:|:.|::...|.||.:.|..:     |      :..:::.
  Fly   340 L--VPA--PNRLISWTLLLRPFQFVLWMCVMLCLLLESLALGITRR-----W------EHSSVAA 389

  Fly   574 GNQF--SLTDSFWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMI 636
            ||.:  ||......|:..|:.||.:....:.:.|.:........:|:...|:..|||.||...:.
  Fly   390 GNSWISSLRFGCISTLKLFVNQSTNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLE 454

  Fly   637 NPIENAEDLASQTEISYGTLDSGSTMTFFR--DSVIETYKKIWRSMDNKKPSAFTTTYEDG--IK 697
            ...::.:.|.....|..||..:..|....|  |.|:....:.:|..|....|||:.|.:.|  ::
  Fly   455 EAADSRQRLFDHKLIWTGTSQAWITTIDERSADPVLLGLMEHYRVYDANLISAFSHTEQMGFVVE 519

  Fly   698 RVNQGNYAFLMESTMLDYIVQRDCNLTQIGGLLDTKGYGIA---TPKGSPWRDKISLAILELQER 759
            |:..|:    :.:|.|   ::.|. |.::..::|...:...   .|:..|..:..:..||.....
  Fly   520 RLQFGH----LGNTEL---IENDA-LKRLKLMVDDIYFAFTVAFVPRLWPHLNAYNDFILAWHSS 576

  Fly   760 GDIQMLYDK-W-WKNTDE--TCTRKNTSKQS-KAN------SLGLESIGGVFVVLIAGIIVAAVV 813
            |     :|| | ||...|  ...|:|....| |.|      .||:::..|:.::...|:|.:.:.
  Fly   577 G-----FDKFWEWKIAAEYMNAHRQNRIVASEKTNLDIGPVKLGIDNFIGLILLWCFGMICSLLT 636

  Fly   814 AFFEFW 819
            ...|.|
  Fly   637 FLGELW 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 12/56 (21%)
ANF_receptor 39..371 CDD:279440 10/39 (26%)
PBP2_iGluR_Kainate 402..771 CDD:270432 90/396 (23%)
Lig_chan 533..807 CDD:278489 64/293 (22%)
Ir76aNP_001097647.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463069
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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