DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ekar and Ir75a

DIOPT Version :9

Sequence 1:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster


Alignment Length:750 Identity:140/750 - (18%)
Similarity:275/750 - (36%) Gaps:192/750 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 QLVNYAFNDVIQYLNWTRFG---ILH--EKENGIINLHQLSRS------FHGEVHMRQVSRDSYV 184
            ||.|:..::::|    :|.|   :.|  :.:..:....|..:.      :|..|.||.|...|::
  Fly     5 QLANFVLDNLVQ----SRIGFIVLFHCWQSDESLKFAQQFMKPIHPILVYHQFVQMRGVLNWSHL 65

  Fly   185 SALNEFKGKEIHN-----IIIDTNSNGISILLKNILQQQMNEYKYHYLF--TSFDLETYDLEDFK 242
            ..  .:.|   |.     |.:|...:....||:...::|:....||:|.  ....||.|||    
  Fly    66 EL--SYMG---HTQPTLAIYVDIKCDQTQDLLEEASREQIYNQHYHWLLVGNQSKLEFYDL---- 121

  Fly   243 YNFVNITSFRLVDTADVG-VKQILKD----IGLYSHHIFKKPYL---NLHIKKSTILESEPALMF 299
            :...||:    :| |||. ||:.::|    :....|.::....:   .|::..|..:..:|.:  
  Fly   122 FGLFNIS----ID-ADVSYVKEQIQDNNDSVAYAVHDVYNNGKIIGGQLNVTGSHEMSCDPFV-- 179

  Fly   300 DSVYVFAIGLQTLEQSHSLTLLNISCEEENSWDGGLSLINYLNAVEWKGLTGPIQFKDGQRVQFK 364
                        ..::..|:    |.::.:.:.....|.:.:..|.......|:...|.:.::| 
  Fly   180 ------------CRRTRHLS----SLQKRSKYGNREQLTDVVLRVATVVTQRPLTLSDDELIRF- 227

  Fly   365 LDLIKLKQHSIVKVGEWTPHGHLNITEPSMFFDAGSMNVTLVVITILETPYVMMHYGKNFTGNER 429
                 |.|.:...:......|               .::||::..:|       |....|..::.
  Fly   228 -----LSQENDTHIDSLARFG---------------FHLTLILRDLL-------HCKMKFIFSDS 265

  Fly   430 FYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMKYKADLAVGSMTITYAR 494
            :                              :|....|   |.|..::...|||   :.|.:.|.
  Fly   266 W------------------------------SKSDVVG---GSVGAVVDQTADL---TATPSLAT 294

  Fly   495 ESVIDFTKPFMNLGI--SI-LFKVPTSEPTRLFSFMNPLAIEIW-----IYVLIAYFLVSLCIYI 551
            |..:.:....:..|.  |: :|:.|.:...|...|:.|.:..:|     :..||. .|:.:..|:
  Fly   295 EGRLKYLSAIIETGFFRSVCIFRTPHNAGLRGDVFLQPFSPLVWYLFGGVLSLIG-VLLWITFYM 358

  Fly   552 VGKLSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSL 616
            ..|.....|:      |:.:.     ||..:|..:.|....||..:.||:...|:|.......|.
  Fly   359 ECKRMQKRWR------LDYLP-----SLLSTFLISFGAACIQSSSLIPRSAGGRLIYFALFLISF 412

  Fly   617 IIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGSTMTFFRDSVI-ETYKKIWRSM 680
            |:...||:.:.:.|.:..:.:.|:....|| ::.::.|......|.::...|.: |.:..|.|.:
  Fly   413 IMYNYYTSVVVSSLLSSPVKSKIKTMRQLA-ESSLTVGLEPLPFTKSYLNYSRLPEIHLFIKRKI 476

  Fly   681 DN--KKPSAFTTTYEDGIKRV--NQGNYAFLME-STMLDYI-----VQRDCNLTQIGGLLDTKGY 735
            ::  :.|..:... |.|:.||  |.| |.::.| |:...|:     .|..|:|.::         
  Fly   477 ESQTQNPELWLPA-EQGVLRVRDNPG-YVYVFETSSGYAYVERYFTAQEICDLNEV--------- 530

  Fly   736 GIATP---------KGSPWRDKISLAILELQERGDIQMLYDK---WWKNTDETCTRKNTSKQSKA 788
             :..|         :.|.:::...|..|.:.|.|    :|.|   :|.:....|..:|.     .
  Fly   531 -LFRPEQLFYTHLHRNSTYKELFRLRFLRILETG----VYRKQRSYWVHMKLHCVAQNF-----V 585

  Fly   789 NSLGLESIGGVFVVLIAGIIVAAVVAFFEF-WYNF 822
            .::|:|.:..:.::||...|:..|:...|. |..|
  Fly   586 ITVGMEYVAPLLLMLICADILVVVILLVELAWKRF 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 52/282 (18%)
ANF_receptor 39..371 CDD:279440 49/265 (18%)
PBP2_iGluR_Kainate 402..771 CDD:270432 76/399 (19%)
Lig_chan 533..807 CDD:278489 61/301 (20%)
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 61/299 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462802
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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