Sequence 1: | NP_001036250.1 | Gene: | Ekar / 43806 | FlyBaseID: | FBgn0039916 | Length: | 899 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
Alignment Length: | 942 | Identity: | 269/942 - (28%) |
---|---|---|---|
Similarity: | 465/942 - (49%) | Gaps: | 149/942 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 VRIGAIFSNQPGMYNSEL----AFRYAIHRLNMDKSLLPETTVDYY--VEYVNRFDSFETVQK-V 80
Fly 81 CKLIRVGVQAVFSPTDSVLATHINSICDALDIPNI-------GRSA----HDFSINVYPSKQLVN 134
Fly 135 YAFNDVIQYLNWTRFGILHEKENG-----IINLHQLSRSFHGEVHMRQVSRDSYVSAL-NEFKGK 193
Fly 194 EIHNIIIDTNSNGISILLKNILQQQMNEYKYHYLFTSFDLETY---------DLEDFKYNFVNIT 249
Fly 250 SFRLVDTADVGVKQILKDIGLYSHHIFKKPYLNLHIKKSTILE-SEPA------LMFDSVYVFAI 307
Fly 308 GLQTLE--QSHSLTLLNISCEEENS----WDGGLSLINYLNAVEWKGLTGP---------IQF-K 356
Fly 357 DGQRVQFKLDLIKLKQHSIVKVGEWTPHG---HLNI---TEPSMFFDAGSMNVTLVVITILETPY 415
Fly 416 VMMHYGK-----NFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQ 475
Fly 476 LMKYKADLAVGSMTITYARESVIDFTKPFMNLGISIL-FKVPTSEPTRLFSFMNPLAIEIWIYVL 539
Fly 540 IAYFLVSLCIYIVGKLSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMST 604
Fly 605 RIISSTWGFFSLIIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGSTMTFFRDSV 669
Fly 670 IETYKKIWRSMDNKKPSAFTTTYEDGIKRV--NQGNYAFLMESTMLDYIVQRDCNLTQIGGLLDT 732
Fly 733 KGYGIATPKGSPWRDKISLAILELQERGDIQMLYDKWWKNTDETCTRKNTSKQSKANSLGLESIG 797
Fly 798 GVFVVLIAGIIVAAVVAFFEFWYNFRYNYEATPSQSVVNNKYNQDGILESERNYTPPDRSFWIEI 862
Fly 863 AEELRYASWCMNKQKRPALTRT--CSKCTIPK 892 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ekar | NP_001036250.1 | PBP1_iGluR_Kainate | 24..388 | CDD:107377 | 95/422 (23%) |
ANF_receptor | 39..371 | CDD:279440 | 87/387 (22%) | ||
PBP2_iGluR_Kainate | 402..771 | CDD:270432 | 142/376 (38%) | ||
Lig_chan | 533..807 | CDD:278489 | 100/275 (36%) | ||
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 93/414 (22%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 17/102 (17%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 142/382 (37%) | ||
Lig_chan | 554..828 | CDD:278489 | 100/275 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45462693 | |
Domainoid | 1 | 1.000 | 82 | 0.746 | Domainoid score | I2907 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S6275 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D60688at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.900 |