DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ekar and Ir8a

DIOPT Version :9

Sequence 1:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster


Alignment Length:950 Identity:213/950 - (22%)
Similarity:388/950 - (40%) Gaps:238/950 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 VDYYVEYVNRFDSFET----VQKVCKLIRVGVQ---AVFSPTDSVLATHINSICDALDIPNIGRS 118
            :.:::|.|.|.: |:|    |.|....:|:.|:   ...:.|.|.....:...|:.|.  .:|.|
  Fly    22 ITFWIEPVQRAE-FDTDIAMVLKELDALRLDVKVDDTTLTLTRSEDGLDMQRFCEILS--TVGAS 83

  Fly   119 AHDFSINVYPSKQLVNYAFNDVIQYLNWTR-FGILHEKENGIINLHQLSRSF---HGEVHMRQV- 178
            |            :::      :.|.:|.. :.::.....|.:.|.::.|.|   .|: .|||. 
  Fly    84 A------------VID------LTYSHWEEGYNLVRSLGIGYVRLERIMRPFLDMFGD-FMRQKR 129

  Fly   179 ----------SRDSYVSALNEFKGKEIHNIIIDTNS----------------------------- 204
                      :||:..:......|.....:|:|.:.                             
  Fly   130 ANNVAMVFMNARDAVEAMQQMLVGYPFRTLIMDASQTDPGQHFLERIRSLRPAPTYIALFARAAA 194

  Fly   205 -NGI--SILLKNILQQQMNEYKYHYLFTSFDLETYDLEDFKY--NFVNITSFRLVDTADVGVKQI 264
             |||  .:...::.|:.:   ::|::|    |:|.| ..|||  .....|.|.|...| :.....
  Fly   195 MNGIFEKVQKADLFQRPL---EWHFVF----LDTRD-RVFKYRRQAELCTRFTLNPRA-ICRSMP 250

  Fly   265 LKDIGLYSHHIFKKPYLNLHIKKSTILESEPALMFDSVYVFAIGLQTLEQSHSLTLLNISCEEEN 329
            :.|:...|....::..| |::.:|.|    .|......|..|| .|....:.|.:.::...|:::
  Fly   251 MPDLYCGSGFTMQRAML-LNVLRSLI----NAAQVSPGYPLAI-YQDCNATASSSEVSDPLEKDD 309

  Fly   330 SWDGGLSLINYLNAVEWK---------------------GLTGPIQFKDG---QRVQFKLDLIKL 370
                    .|:|:.|.|.                     |||..:....|   ...:.|.||   
  Fly   310 --------YNWLDMVHWSNFLAYAPPLPHIQDQFQSPVPGLTFAVNISAGYYSSEHEAKTDL--- 363

  Fly   371 KQHSIVKVGEWTPHGHLNITEPSM-----FFDAGSMNVTLVVITILETPYVMMHYG-----KNFT 425
                    ..|:..|.:.:...::     ||..|:..       .:...|:....|     ::.:
  Fly   364 --------AAWSSVGEMRLLNETISPARRFFRIGTAE-------SIPWSYLRREEGTGELIRDRS 413

  Fly   426 GNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMKYKADLAVGSMTI 490
            |...:.|:|:|.:..:|:::.|::.: :.|:..:..:..|.|||:|:|..|::.:.|.|:.::.:
  Fly   414 GLPIWEGYCIDFIIRLSQKLNFEFEI-VAPEVGHMGELNELGEWDGVVGDLVRGETDFAIAALKM 477

  Fly   491 TYARESVIDFTKPFM-NLGISILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGK 554
            ...||.||||..|:. ..||||..:.|... |.||.||..|.:|:|:.::.|....::.|:.:.|
  Fly   478 YSEREEVIDFLPPYYEQTGISIAIRKPVRR-TSLFKFMTVLRLEVWLSIVAALVGTAIMIWFMDK 541

  Fly   555 LSPIEWKCIN-------ACDLENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMSTRIISSTWG 612
            .||  :...|       ||        .:|:|.:||||.:.:|..|.....|:|:|.|::.:.:.
  Fly   542 YSP--YSSRNNRQAYPYAC--------REFTLRESFWFALTSFTPQGGGEAPKAISGRMLVAAYW 596

  Fly   613 FFSLIIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGST------MTFFRDSVIE 671
            .|.::::|::|||||||||.|||..|:::.|.||.|:.|:|..:....|      |.|..|::..
  Fly   597 LFVVLMLATFTANLAAFLTVERMQTPVQSLEQLARQSRINYTVVKDSDTHQYFVNMKFAEDTLYR 661

  Fly   672 TYK-------------KIW------------RSMDNKKPSAFTTTYEDGIKRVN---QGNYAFLM 708
            .:|             :||            .::::.:|.|   ..::|...|:   ..:|||:.
  Fly   662 MWKELALNASKDFKKFRIWDYPIKEQYGHILLAINSSQPVA---DAKEGFANVDAHENADYAFIH 723

  Fly   709 ESTMLDYIVQRDCNLTQIGGLLDTKGYGIATPKGSPWRDKISLAILELQERGDIQMLYDKWWKNT 773
            :|..:.|.:.|:||||::|.:...:.|.:|..:||...|::|.||||||:....:.|..|:|..:
  Fly   724 DSAEIKYEITRNCNLTEVGEVFAEQPYAVAVQQGSHLGDELSYAILELQKDRFFEELKAKYWNQS 788

  Fly   774 DETCTRKNTSKQSKANSLGLESIGGVFVVLIAGIIVAAVVAFFE-FWYNFRYNYEATPSQSVVNN 837
            :    ..|.........:.|||:||||:..:.|:::|.:....| .:|..:.|.........||:
  Fly   789 N----LPNCPLSEDQEGITLESLGGVFIATLFGLVLAMMTLGMEVLYYKKKQNALEITQVRPVND 849

  Fly   838 KYNQDG--------------------ILESER---NYTPP 854
            .....|                    :||:|.   ..:||
  Fly   850 SSGSGGNSSTAPPTATSTTKQAWHIPVLEAEEKPAKVSPP 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 73/406 (18%)
ANF_receptor 39..371 CDD:279440 71/389 (18%)
PBP2_iGluR_Kainate 402..771 CDD:270432 115/415 (28%)
Lig_chan 533..807 CDD:278489 88/314 (28%)
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 118/424 (28%)
Lig_chan 520..818 CDD:278489 88/314 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 1 1.000 - - mtm1027
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.910

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