Sequence 1: | NP_001036250.1 | Gene: | Ekar / 43806 | FlyBaseID: | FBgn0039916 | Length: | 899 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036707.3 | Gene: | Grin2c / 24411 | RGDID: | 2739 | Length: | 1250 | Species: | Rattus norvegicus |
Alignment Length: | 802 | Identity: | 195/802 - (24%) |
---|---|---|---|
Similarity: | 334/802 - (41%) | Gaps: | 203/802 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 170 HGEVHMRQVSRDSYVSALNEFKGKEIHNIIIDTNSNGISILLK-------------------NIL 215
Fly 216 QQQMNEYKY------------HYLFTSFDLE-TYDLEDFKYNFVNITSFRLVD--TADVG----- 260
Fly 261 --VKQILKDI------------------------GLYS-HHIFKKPYLNLHIKKSTILESEPAL- 297
Fly 298 -------------------MFDSVYVFAIGLQTLEQSHSLTLLNISCEEENSWDGGLS-----LI 338
Fly 339 NYLNAVEWKGLTGPIQFKD------GQRVQFKLDLIKLKQHSIVK-VGEWTPHGHLNITEPSMFF 396
Fly 397 DAGSMNVT-----LVVITILETPYVMMHYGKNFTG-------------NERF------------- 430
Fly 431 YGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMKYKADLAVGSMTITYARE 495
Fly 496 SVIDFTKPFMNLGISILFKVP--TSEPTRLFSFMNPLAIEIWIYVLI-AYFLVSLCIYIVGKLSP 557
Fly 558 IEWKCINACDLENISIGNQ-----FSLTDSFWFTIG-TFMQQSPDIYPRAMSTRIISSTWGFFSL 616
Fly 617 IIVASYTANLAAFLTTERMINPIENAEDLASQ------TEISYGTLDSGSTMTFFRDSVIETYKK 675
Fly 676 IWRSMDNKKPSAFTTTYEDGIKRVNQGNY-AFLMESTMLDYIVQRD--CNLTQIGG--LLDTKGY 735
Fly 736 GIATPKGSPWRDKISLAILELQERGDIQMLYDKWWKNTDETCTRKNTSKQSKANSLGLESIGGVF 800
Fly 801 VVLIAGIIVAAVVAFFE---FW 819 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ekar | NP_001036250.1 | PBP1_iGluR_Kainate | 24..388 | CDD:107377 | 62/315 (20%) |
ANF_receptor | 39..371 | CDD:279440 | 55/297 (19%) | ||
PBP2_iGluR_Kainate | 402..771 | CDD:270432 | 119/419 (28%) | ||
Lig_chan | 533..807 | CDD:278489 | 77/291 (26%) | ||
Grin2c | NP_036707.3 | PBP1_iGluR_NMDA_NR2 | 41..397 | CDD:380601 | 63/318 (20%) |
PBP2_iGluR_NMDA_Nr2 | 413..813 | CDD:270436 | 120/424 (28%) | ||
NMDAR2_C | 850..>925 | CDD:402274 | 1/5 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166350208 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |