Protein Alignment Ekar and W02A2.5

DIOPT Version :9

• Sequence 1: NP_001036250.1
• Gene: Ekar / 43806
• FlyBaseID: FBgn0039916
• Length: 899
• Species: Drosophila melanogaster
• Sequence 2: NP_502564.2
• Gene: W02A2.5 / 189098
• WormBaseID: WBGene00012190
• Length: 487
• Species: Caenorhabditis elegans
• Alignment Length: 417
• Identity: 81/417 - (19%)
• Similarity: 168/417 - (40%)
• Gaps: 48/417 - (11%)

  Fly   430 FYGFCVDILETISREVGFDYILDLVPDRKYGAKD----PETGEWNGMVAQLMKYKADLAVGSMTI 490
            |.|:.:::|:.|:..:.:: |:.:|.....|..|    .:.|.|:|::..|....||........
 Worm    36 FPGWTMEVLKMITDSLKWE-IIPVVTPTIVGGLDWGTLQKNGTWSGVLGYLQNGTADAVALMYQK 99

  Fly   491 TYARESVIDFTKPFMNL-GISILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGK 554
            |..|....:::.|..|: .:.:..|...:..:.|::...|.::|:|: .|:|..:::|.|.|.
 Worm   100 TDTRNEYFEYSYPVTNVQPVFVARKKTETLGSVLWNAFKPFSVEVWL-CLLASLVLNLLIMIA-- 161

  Fly   555 LSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFM-QQSPDIYPRAMSTRIISSTWGFF-SLI 617
            :|.||:|.:         ..::|...:..|..:...: ::|.|:....:|..|:...:... |.|
 Worm   162 ISGIEFKLL---------FRSRFRPWEMLWHVVQLQLDEKSDDMLFYTLSGNIVLFVFALLQSGI 217

  Fly   618 IVASYTANLAAFLTTERMINPIENAEDLASQT-EISYGTLDSGSTMTFFRD---SVIETYKKIWR 678
            ::..|...|...|.|....||..||:::.... |..|....:.....:|.|   |..:.:..: |
 Worm   218 LIEVYKGMLLTALITSNGDNPFANADEMIKLIGEKKYHLTTNYMGNWYFDDLQHSDQQHFVSL-R 281

  Fly   679 SMDNKKPSAFTTTYEDGIKRVNQGNYAFLMESTMLDYIVQRD-CNLTQIG-GLLDTKGYGIATPK 741
            :.....|.....:....:..|:.|.|.:.::...|...:.:: ||...:. |:.....:.:.|..
 Worm   282 AATASNPVIPAASVSAALDLVDSGKYIYPIQQDSLAMQMSKERCNYVYVSDGMPQVSSFFVFTKN 346

  Fly   742 GSPWRDKISLAILE-----LQERGDIQMLYDKWWKNTDE-----TCTRKNTSKQSKANSLGLESI 796
            .|        .|.|     :..:..||..::|::....:     .|.....:.......|.:||:
 Worm   347 FS--------GIAEFNTQIIMNQAFIQRTFNKYFNEGFKLGFIPKCEVTEPTASDATKPLDIESV 403

  Fly   797 GGVFVVLIAGIIVAAVVAFFE---FWY 820
            .|||.:...|:..:.:|..||   :|:
 Worm   404 IGVFTIGALGVAASLMVFVFEIYHYWH 430

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ekar	NP_001036250.1	PBP1_iGluR_Kainate	24..388	CDD:107377
		ANF_receptor	39..371	CDD:279440
		PBP2_iGluR_Kainate	402..771	CDD:270432	69/358 (19%)
		Lig_chan	533..807	CDD:278489	55/291 (19%)
W02A2.5	NP_502564.2	Lig_chan-Glu_bd	<36..86	CDD:214911	11/50 (22%)
		Periplasmic_Binding_Protein_Type_2	<74..>124	CDD:304360	10/49 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1052
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810