Sequence 1: | NP_001036250.1 | Gene: | Ekar / 43806 | FlyBaseID: | FBgn0039916 | Length: | 899 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_579842.2 | Gene: | Grin3b / 170796 | RGDID: | 621705 | Length: | 1002 | Species: | Rattus norvegicus |
Alignment Length: | 677 | Identity: | 162/677 - (23%) |
---|---|---|---|
Similarity: | 285/677 - (42%) | Gaps: | 141/677 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 296 ALMFDSVYVFAIGLQTLEQSH---SLTLLNISCEE---ENSWDGGLSLINYLNAVEWKGLTGPIQ 354
Fly 355 FKDGQRV----QFKLDLIK---LKQHSIVKVGEWTPHGHLNITEPSMFFDAGSMNV--------- 403
Fly 404 -TLVVITILETPYVM----------------MHYGKN------------------FTGNERFYGF 433
Fly 434 CVDILETISREVGFDYILDLVPDRKYGA-KDPETGEWNGMVAQLMKYKADLAVGSMTITYARESV 497
Fly 498 IDFTKPFMNLGISILFKV-PTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGKLSPIEWK 561
Fly 562 CINACDLENISIGNQFSLTDS----FWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASY 622
Fly 623 TANLAAFLTTERMINPIENAED--LASQTE-ISYGTLDSGSTMTFFRDSVIETYKKIWRSMDNKK 684
Fly 685 PSAFTTTYEDGI-------KRVNQGNYAFLMESTMLDY--IVQRDCNLTQIGGLLDTKGYGIATP 740
Fly 741 KGSPWRDKISLAILELQERGDIQMLYDKWWKNTDETCTRKNTSKQSKANSLGLESIGGVFVVLIA 805
Fly 806 GIIVAAVVAFFEFWYNFRYNYEATPSQSVVNNKYNQDGILESERNYTPPDRSFWIEIAEELRYAS 870
Fly 871 WCMN------KQKRPALTRTCSKCTIP 891 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ekar | NP_001036250.1 | PBP1_iGluR_Kainate | 24..388 | CDD:107377 | 23/104 (22%) |
ANF_receptor | 39..371 | CDD:279440 | 18/87 (21%) | ||
PBP2_iGluR_Kainate | 402..771 | CDD:270432 | 114/430 (27%) | ||
Lig_chan | 533..807 | CDD:278489 | 71/289 (25%) | ||
Grin3b | NP_579842.2 | PBP1_iGluR_NMDA_NR3 | 21..405 | CDD:107372 | 26/119 (22%) |
PBP2_iGluR_NMDA_Nr3 | 414..808 | CDD:270438 | 112/419 (27%) | ||
Lig_chan | 576..842 | CDD:278489 | 71/289 (25%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 882..910 | 7/29 (24%) | |||
Involved in the trafficking and surface expression of NMDARs. /evidence=ECO:0000250 | 951..984 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166350194 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |