Sequence 1: | NP_001036250.1 | Gene: | Ekar / 43806 | FlyBaseID: | FBgn0039916 | Length: | 899 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017952374.2 | Gene: | grin3b / 100497172 | XenbaseID: | XB-GENE-990106 | Length: | 1005 | Species: | Xenopus tropicalis |
Alignment Length: | 1039 | Identity: | 226/1039 - (21%) |
---|---|---|---|
Similarity: | 383/1039 - (36%) | Gaps: | 275/1039 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 VRIGAIFSNQPGMYNSELAFRYAIHRLNMDKSLLPETTVDYYVEYVNRFDSFETVQK-VCK-LIR 85
Fly 86 VGVQAVFS-PTDSVLATHINSICDALDIPNIGRSAHDFSINVYPSKQLVNYA------------- 136
Fly 137 --------FNDVIQYLNWTRFGILHEKENGIINLHQLSRSFHGEVHMRQVSRDSYVSALNEFKGK 193
Fly 194 EIHNI-IIDTNSNGISILLKNILQQQMNEYKYHYLFTSFDLETYDLEDFKYNFVNITSFRLVDTA 257
Fly 258 DVGVKQILKDIGLYSHHIFKKPYLNLHIKKSTILESEPALM---------FDSVYVFAIGLQTLE 313
Fly 314 QSHS------LTLLN--ISCEE---ENSWDGGLSLINYLNAVEWKGLTGPIQFKDGQRVQFKLDL 367
Fly 368 IKLKQH----SIVK----------VGEWTPHGHLNIT-----------EPSMFFDAGSMNVTLVV 407
Fly 408 ITILETPYVMMH---------YGKNF----TGNERF-----------------------YGFCVD 436
Fly 437 ILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMKYKADLAVGSMTITYARESVIDFT 501
Fly 502 KPFMNLGISILFKV-PTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGKLSPIEWK---- 561
Fly 562 ----------------CINACDLENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMSTRIISST 610
Fly 611 WGFFSLIIVASYTANLAAFLTTERMINPIENAED--LASQTE-ISYGTLDSGSTMTFFRDSVIET 672
Fly 673 YKKIWRSMDNKKPSAFTTTYEDGIKRVNQGN---YAFLMESTMLDY--IVQRDCNLTQIGGLLDT 732
Fly 733 KGYGIATPKGSPWRDKISLAILELQERGDIQMLYDKWWKNTDETCTRKNTSKQSKANSLGLESIG 797
Fly 798 GVFVVLIAGIIVAAVVAFFE-FWYNF---------RYNYEATPSQSV-------------VNNKY 839
Fly 840 NQDGILESERNYTPPDRSFWIEI----AEELRYASWCMNKQKRPALTRTCSKCTIPKGQRINKL 899 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ekar | NP_001036250.1 | PBP1_iGluR_Kainate | 24..388 | CDD:107377 | 80/422 (19%) |
ANF_receptor | 39..371 | CDD:279440 | 69/376 (18%) | ||
PBP2_iGluR_Kainate | 402..771 | CDD:270432 | 111/433 (26%) | ||
Lig_chan | 533..807 | CDD:278489 | 68/301 (23%) | ||
grin3b | XP_017952374.2 | PBP1_iGluR_NMDA_NR3 | 29..402 | CDD:380600 | 81/429 (19%) |
PBP2_iGluR_NMDA_Nr3 | 418..814 | CDD:270438 | 110/432 (25%) | ||
Lig_chan | 582..848 | CDD:395014 | 68/301 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |