Sequence 1: | NP_001036250.1 | Gene: | Ekar / 43806 | FlyBaseID: | FBgn0039916 | Length: | 899 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017213803.2 | Gene: | grin3bb / 100333101 | ZFINID: | ZDB-GENE-131122-77 | Length: | 1114 | Species: | Danio rerio |
Alignment Length: | 998 | Identity: | 218/998 - (21%) |
---|---|---|---|
Similarity: | 373/998 - (37%) | Gaps: | 254/998 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 VRIGAIFSNQPGMYNSELAFRYAIHR-----LNMDKSLLP-ETTVDYYVEYVNRFDSFETVQKVC 81
Fly 82 KLIRV-GVQAVFS-PTDSVLATHINSICDALDIPNIG--------RSAHDFSINV---YPSKQLV 133
Fly 134 NYAFNDVIQYLNWTR-FGIL-HEKEN-GIINLHQLSRSF---HGEVHMRQVSRDSYVSA----LN 188
Fly 189 EFKGKEI---HN-----IIIDTNSNGISILLKN-------------ILQQQMNEYKYHYLFTSFD 232
Fly 233 LETYDLEDFK-YNFVNITSFRLVDTADVGVKQILKDIGLYSHHI--FKKPYLNLHIKKSTILESE 294
Fly 295 PALMFDSVYVFAIGLQTLEQSHSLTLLNISCEEENSWDGGLSLINYLNAVEWKGLTGP-IQFKDG 358
Fly 359 QRV--QFKLDLIKLKQHSI-----VKVGEWTPHGHLNITEPSMFFDAGSMNVT------------ 404
Fly 405 ---------LVVITILETPYVMMH----------------------------YGKNFTGNERF-- 430
Fly 431 -------YGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMKYKADLAVGSM 488
Fly 489 TITYARESVIDFTKPFMNLGISILFK-VPTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIV 552
Fly 553 GKLSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFMQQS--------------PDIYPRAMS 603
Fly 604 TRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIENAEDL----ASQTEISYGTLDSGSTMTF 664
Fly 665 FRDSVIETYKKIWRSMDNKKPSAFTTTYEDGIKRVNQGNYAFLMESTMLDY--IVQRDCNLTQIG 727
Fly 728 GLLDTKGYGIATPKGSPWRDKISLAILELQERGDIQMLYDKWWKNTDETCTRKNTSKQSKANSLG 792
Fly 793 LESIGGVFVVLIAGIIVAAVV-----AF-------------FEFWYN--------FRYNYEATPS 831
Fly 832 QSVVNNKYNQDGILESERNYTPP 854 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ekar | NP_001036250.1 | PBP1_iGluR_Kainate | 24..388 | CDD:107377 | 79/424 (19%) |
ANF_receptor | 39..371 | CDD:279440 | 70/387 (18%) | ||
PBP2_iGluR_Kainate | 402..771 | CDD:270432 | 115/447 (26%) | ||
Lig_chan | 533..807 | CDD:278489 | 69/293 (24%) | ||
grin3bb | XP_017213803.2 | PBP1_iGluR_NMDA_NR3 | 29..428 | CDD:107372 | 83/433 (19%) |
PBP2_iGluR_NMDA_Nr3 | 457..852 | CDD:270438 | 113/423 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170591832 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |