DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ekar and LOC100331381

DIOPT Version :9

Sequence 1:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster
Sequence 2:XP_017207884.1 Gene:LOC100331381 / 100331381 -ID:- Length:1063 Species:Danio rerio


Alignment Length:874 Identity:321/874 - (36%)
Similarity:481/874 - (55%) Gaps:81/874 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LIASGFLLFQFLSYGLG------VPPL--VRIGAIFSNQPGMYNSE-LAFRYAIHRLN--MDKSL 55
            |:.|..|||..|...:.      ||.|  ||:.||..:|......| ||...|...:|  |:...
Zfish     7 LLLSIHLLFLVLLLTMAPSSHSQVPALSAVRMAAILDDQSACGRGERLALALARENINSLMEGPA 71

  Fly    56 LPETTVDYYVEYVNRFDSFETVQKVCKLIRVGVQAVFSPTDS-VLATHINSICDALDIPNIGRSA 119
            .....||.:  .:.|...:||...:|:::..||.:|..|..| ...:.::.||...:||:|....
Zfish    72 RARVEVDIF--ELQRDSQYETTDTMCQILPKGVVSVIGPASSPASGSTVSHICGEKEIPHIKIGP 134

  Fly   120 HD---------FSINVYPSKQLVNYAFNDVIQYLNWTRFGILHEKENGIINLHQLSRSFHGEVHM 175
            .:         .|:.:|||.:.::.|...:::...:....::..|...::.|.:|.|.|      
Zfish   135 EETPRLPYLRFASVTLYPSNEDLSLAIGAILRSFGYPTASLICAKAECLLRLEELVRHF------ 193

  Fly   176 RQVSRDSY-----------VSALNEFKGKEIHNIIIDTNSNGISILLKNILQQQMNEYKYHYLFT 229
             .:||::.           ...|.|.:..::..||||.|::...::||...:..|....|.|:.|
Zfish   194 -LISRETLSVRMLDENLDPTPLLKEIRDDKVATIIIDANASVSILILKKASELGMTSAFYKYILT 257

  Fly   230 SFDLETYDLEDFKYNFVNITSFRLVDTADVGVKQILKDIGLYSHHIFKKPYLNLHIKKSTILESE 294
            :.|.....|:|...:..||..|.:::.:.....:.::.             |||..::...|...
Zfish   258 TMDFPLLRLDDVVNDQSNIVGFSMLNNSHPFYLEFIRS-------------LNLSWREGCDLSPY 309

  Fly   295 P------ALMFDSVYVFAIGLQTLEQSHSLTLLNISCEEENSWDGGLSLINYLNAVEWKGLTGPI 353
            |      |||||:|:|....::.|.:|..:.:..:||.....|..|.||:|||..||:.||||.:
Zfish   310 PGPALSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCTSSLIWQHGTSLMNYLRMVEYDGLTGRV 374

  Fly   354 QFKD-GQRVQFKLDLIKLKQHSIVKVGEWTPHGHLNITEPSMFFDAGS--MNVTLVVITILETPY 415
            :|.. |||..:.|.:::..:....::|.|..:..|.:...|:..:...  .|.||.|.||||.||
Zfish   375 EFNSKGQRTNYTLRILEKFKGGHKEIGVWYSNNTLAMNSTSLDINTSETLANKTLTVTTILENPY 439

  Fly   416 VMM--HYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMK 478
            ||.  :| ::|.|::::.|||||:|..::..:.|.:.:.||.|..|||.:| .|.|.|||.:|:.
Zfish   440 VMRKENY-QDFQGSDQYEGFCVDMLRELADILKFSFRIKLVDDGLYGAPEP-NGSWTGMVGELIN 502

  Fly   479 YKADLAVGSMTITYARESVIDFTKPFMNLGISILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYF 543
            .||||||...|||..||.||||:|||||||||||::|........|||::|.:..:|:::|:||.
Zfish   503 RKADLAVAGFTITSEREKVIDFSKPFMNLGISILYRVHIGRKPGYFSFLDPFSPAVWLFMLLAYL 567

  Fly   544 LVSLCIYIVGKLSPIEWKCINAC-----DLENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMS 603
            .||..:::..:|||.||.....|     ||    :.||::|.:|.||.||.||||..:|.|||:|
Zfish   568 AVSCVLFLAARLSPYEWYNPFPCWRERRDL----LENQYTLGNSLWFPIGGFMQQGSEIMPRALS 628

  Fly   604 TRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGSTMTFFRDS 668
            ||.:|..|..|:|||::|||||||||||.:||..|||:|||||.||.|.|||:..|||||||.:|
Zfish   629 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESAEDLADQTNIQYGTIQGGSTMTFFMNS 693

  Fly   669 VIETYKKIWRSMDNKKPSAFTTTYEDGIKRVNQGNYAFLMESTMLDYIVQRDCNLTQIGGLLDTK 733
            ..:||:::|..|.:|:||.|..:.|:||.||....||||:||||.:|..:.:|||||||||||||
Zfish   694 RYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSKYAFLLESTMNEYHRRLNCNLTQIGGLLDTK 758

  Fly   734 GYGIATPKGSPWRDKISLAILELQERGDIQMLYDKWWKNTDETCTRKNTSKQSKANSLGLESIGG 798
            ||||..|.|||:||:|:|.||:|||...:::|..:||:.  ..|.::   :..:|..||:::|||
Zfish   759 GYGIGMPLGSPFRDEITLGILQLQENNRLEILKRRWWEG--GKCLKE---EDHRAKGLGMDNIGG 818

  Fly   799 VFVVLIAGIIVAAVVAFFEFWYNFRYNYE 827
            :|||||.|:|:|..||..||.::.|.:.|
Zfish   819 IFVVLICGLIIAVFVAIMEFVWSTRRSAE 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 93/394 (24%)
ANF_receptor 39..371 CDD:279440 87/362 (24%)
PBP2_iGluR_Kainate 402..771 CDD:270432 194/375 (52%)
Lig_chan 533..807 CDD:278489 141/278 (51%)
LOC100331381XP_017207884.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60688at33208
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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