DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ekar and si:dkey-183j2.10

DIOPT Version :9

Sequence 1:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster
Sequence 2:XP_001923977.1 Gene:si:dkey-183j2.10 / 100151589 ZFINID:ZDB-GENE-130530-729 Length:465 Species:Danio rerio


Alignment Length:452 Identity:161/452 - (35%)
Similarity:257/452 - (56%) Gaps:38/452 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 LVVITILETPYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEW 469
            |:|.||.:.||.|       :...:..|:|:|:|..:::::||.|.:.||.|..||.:| |.|.|
Zfish    31 LIVTTIKQDPYTM-------SKGSQLEGYCMDLLTELAKKLGFKYKVHLVKDGSYGRQD-ENGNW 87

  Fly   470 NGMVAQLMKYKADLAVGSMTITYARESVIDFTKPFMNLGISILF-KVPTSEPTRLFSFMNPLAIE 533
            |||:.::::.:|||||..:|:|.|||..:..|||:|..|||||. |...||....|.|::|.:.|
Zfish    88 NGMIGEVVRGEADLAVAPLTLTAAREKAVGMTKPYMQTGISILLRKDIVSEEAGFFDFLSPFSGE 152

  Fly   534 IWIYVLIAYFLVSLCIYIVGKLSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFMQQSPDIY 598
            .|..:|||||:.::||.|||:|||.||.       :..:..|.|:|..|.|:|.|....|....:
Zfish   153 TWFGILIAYFVTAVCICIVGRLSPCEWS-------QPETEPNHFTLLHSLWYTAGALSLQGAGPH 210

  Fly   599 PRAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGSTMT 663
            |:|:|.|:||.||..|:::::|.|.::|::...::.....|:..||||:|..|.||||...||:.
Zfish   211 PKAVSGRVISCTWWLFAVVLLACYFSSLSSTQGSDSAPLMIKGFEDLANQDVIEYGTLAGSSTLA 275

  Fly   664 FFRDSVIETYKKIWRSMDNKKPSAFTTTYEDGIKRVNQGNYAFLMESTMLDYIVQRDCNLTQIGG 728
            ||::|...:|::|:..|:.:|  :|.::.::|:::..:|||||:.||..||..|.|.|.|.:...
Zfish   276 FFKNSNNPSYRRIYEHMERRK--SFVSSMDEGVQKAKEGNYAFIGESVSLDLAVARHCELVRAHE 338

  Fly   729 LLDTKGYGIATPKGSPWRDKISLAILELQERGDIQMLYDKWWKNTDETCTRKNTSKQSKANSLGL 793
            ::..:||.|.||.||.....:|:|||:|.|.|::..|..|||.:   :|...|    :||:||..
Zfish   339 VIGMRGYSIVTPLGSAMLKNLSVAILQLSEAGELAYLRTKWWAS---SCLPDN----AKASSLRA 396

  Fly   794 ESIGGVFVVLIAGIIVAAVVAFFEFWYNFR-------------YNYEATPSQSVVNNKYNQD 842
            .|:.|:|:||..|:.:..:::.||.....|             ...|.:....:.|.|.:||
Zfish   397 HSMKGIFLVLAIGLGIGVLLSLFELTTKSRSAAGEQKKSCCTVLTQELSQRLRMTNTKRDQD 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377
ANF_receptor 39..371 CDD:279440
PBP2_iGluR_Kainate 402..771 CDD:270432 140/366 (38%)
Lig_chan 533..807 CDD:278489 101/273 (37%)
si:dkey-183j2.10XP_001923977.1 PBP2_iGluR_non_NMDA_like 28..381 CDD:270403 140/366 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.910

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