DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gat and Slc6a19

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_083154.1 Gene:Slc6a19 / 74338 MGIID:1921588 Length:634 Species:Mus musculus


Alignment Length:637 Identity:213/637 - (33%)
Similarity:317/637 - (49%) Gaps:113/637 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 QLVKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMF 112
            ::::.|:...|..|.:|..::|:.||..:||||||||||||..:|||||::|::|.|...|||:.
Mouse    22 EVIEKEEAGSRPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVFEGIPLL 86

  Fly   113 FMELALGQMLTIGGLGVF-KIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWR 176
            ::|.|:||.|..|.:||: .|.|..||||.|:..:|..:.:||..|:||.::|||.|.:..:||.
Mouse    87 YLEFAIGQRLRKGSMGVWSSIHPALKGIGIASMFVSFMVGLYYNTIIAWVMWYFFNSFQEPLPWS 151

  Fly   177 TCNNWWNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQISHG 241
            .|....|....|.:                    |:.|:          .|..||.|..|.||..
Mouse   152 ECPLNQNQTGYVEE--------------------CAKSS----------SVDYFWYRETLNISTS 186

  Fly   242 IEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGI 306
            |.:.|:|:|.:...|...|.:.|.||.:|::.|||.||.|:..|||:|||.|:||:||.||..||
Mouse   187 ISDSGSIQWWILLCLTCAWSVLYVCIIRGIETTGKAVYITSTLPYVVLTIFLIRGLTLKGATNGI 251

  Fly   307 KFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMF 371
            .|...||.::|:|...|:||..|:|:|:.|..|.|::..|||...||...|::||..:|..||::
Mouse   252 VFLFTPNITELSNPNTWLDAGAQVFYSFSLAFGGLISFSSYNSVHNNCEMDSVIVSVINGFTSVY 316

  Fly   372 AGFVIFSVIGFMAHEQ----------------QRPVADVAA------------------------ 396
            |..|::|:|||.|.|:                ..|..:|.:                        
Mouse   317 AATVVYSIIGFRATERFDDCVNTNILTLINGFDLPEGNVTSENFEAYQQWCNATNPQAYAQLKFQ 381

  Fly   397 ------------SGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIID- 448
                        .|.||||:|:..|:.::|.||:||.|||.||..:||.|.|..|||.:..:.| 
Mouse   382 TCDINSFLSEGVEGTGLAFIVFTEAITKMPVSPLWSVLFFIMLFCLGLSSMFGNMEGVVVPLQDL 446

  Fly   449 -----EWPQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVS 508
                 :||      ||:...::|..:||:........|.|...:|||:|.| ..||.:.|.|..:
Mouse   447 NITPKKWP------KELLTGLICLGTYLIAFIFTLNSGQYWLSLLDSFAGS-IPLLIIAFCEMFA 504

  Fly   509 ISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVF-FFNIVQ---------WTPVKYL 563
            :.:.||||||...|:.|||:.|.::|:..|.|.:|.|.|.:| ||.:::         |.| .|.
Mouse   505 VVYVYGVDRFNKDIEFMIGHKPNIFWQVTWRVVSPLIMLVIFLFFFVIEVNKTLMYSIWDP-NYE 568

  Fly   564 DY------SYPWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALV 609
            ::      .||.|.:|.....|....|.||.:..:.:.|...:.|:....||
Mouse   569 EFPKSQKIPYPNWVYAVVVTVAGVPCLSIPCFAIYKFIRNCCQKSDDHHGLV 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 212/627 (34%)
Slc6a19NP_083154.1 SLC5-6-like_sbd 32..612 CDD:294310 209/617 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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