DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and slc6a1a

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001038752.2 Gene:slc6a1a / 692318 ZFINID:ZDB-GENE-060519-23 Length:679 Species:Danio rerio


Alignment Length:613 Identity:343/613 - (55%)
Similarity:440/613 - (71%) Gaps:45/613 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYTNSASDGDGGGDVCKHESIEMSKELGHTTSLQSSSPTTTDT---SNKQQLVKIEQLPDRGSWS 62
            |.||:....||          ::..||...|:  :..|.|.|.   .||      :.:|||.:|.
Zfish     1 MATNNTKSTDG----------QVVTELNEITT--NDKPKTEDAKPEKNK------KDIPDRETWG 47

  Fly    63 SKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGL 127
            .|.||:||.||.||||||||||||||.|||||||::||.:||..||:|:||:|.||||..:||||
Zfish    48 GKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFFLECALGQYTSIGGL 112

  Fly   128 GVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYE 192
            ||:|:||:|||:|.||||:|.|:|:|||||:|||::|.:.|...|:||::|||.|||..|.:.| 
Zfish   113 GVWKLAPMFKGVGLAAAVLSFWLNIYYIVIIAWALYYLYNSFTTDLPWKSCNNPWNTDRCYTNY- 176

  Fly   193 RKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQISHGIEEIGNIRWELAGTLL 257
                    .|::.|               .||..|.|||||...|::.|:|:.|.||..||.||.
Zfish   177 --------SIVDTT---------------NLTSAVMEFWERNVHQMTDGLEKPGEIRVPLAITLA 218

  Fly   258 LVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEV 322
            :.|:|.||||||||.||||||||:|.:||.:|.||.:||:|||||.|||.|||.|:|.||..|||
Zfish   219 IAWVLVYFCIWKGVSWTGKVVYFSATYPYFMLFILFIRGVTLPGAKEGILFYITPDFEKLKESEV 283

  Fly   323 WIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMAHEQ 387
            |:||.||||||||||||:|:||||||.|.||||:|::|||.:||.|||||||||||::|||:|..
Zfish   284 WLDAATQIFFSYGLGLGSLIALGSYNPFNNNVYRDSIIVCCINSFTSMFAGFVIFSIVGFMSHVT 348

  Fly   388 QRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQ 452
            :||:|||||||||||||.||.||.|||.||:|:.|||.|||::|:||||||:||||||::||:|:
Zfish   349 KRPIADVAASGPGLAFLAYPEAVTQLPVSPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPR 413

  Fly   453 LLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDR 517
            |||||:|||||.||.:||.:||:.|||||:|:|::.|.|:.||.|||:|:||||:||||||||::
Zfish   414 LLRKRREIFIACVCVVSYAIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECISISWCYGVNK 478

  Fly   518 FYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDYSYPWWAHAFGWFTALSS 582
            |||.|::||||.|.:|||.||...||.:..|||.|:.||..|:...:|.:|.|....||..||||
Zfish   479 FYDNIQEMIGYKPCIWWKLCWVFFTPLVVAGVFLFSAVQMVPLTMNNYVFPKWGQGVGWLMALSS 543

  Fly   583 MLYIPLYMFWLWKRTPGELSEKIRALVR 610
            |:.||.||.:::....|...|:||.:::
Zfish   544 MVLIPGYMGYMFLNLKGTYKERIRIMLQ 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 328/553 (59%)
slc6a1aNP_001038752.2 SLC5-6-like_sbd 2..588 CDD:294310 342/612 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 713 1.000 Domainoid score I113
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2290
Inparanoid 1 1.050 730 1.000 Inparanoid score I600
OMA 1 1.010 - - QHG49243
OrthoDB 1 1.010 - - D145627at33208
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 1 1.000 - - otm25299
orthoMCL 1 0.900 - - OOG6_100347
Panther 1 1.100 - - LDO PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3352
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.980

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