DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and slc6a4a

DIOPT Version :10

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001035061.1 Gene:slc6a4a / 664719 ZFINID:ZDB-GENE-060314-1 Length:646 Species:Danio rerio


Alignment Length:608 Identity:253/608 - (41%)
Similarity:379/608 - (62%) Gaps:39/608 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GDGGGDVC---KHESIEMSKELGHTTSLQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFILS 70
            |.|.|.|.   :..|.:..||...|.:.:.::|.|..|...|| ..::  |.|.:||.||||:||
Zfish    42 GSGPGQVSNGYRSTSPQSPKEGAGTGTDRVNTPGTFRTLVVQQ-TSLD--PPRETWSKKMDFLLS 103

  Fly    71 VVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVFK-IAP 134
            |:|.|:.|||||||||:||:||||||:|||::.....|:|:|:|||||||....|.:.::| :.|
Zfish   104 VIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFYMELALGQFHRSGCISIWKHVCP 168

  Fly   135 IFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNLHCW 199
            ||||||:|..:::.::..||..|:|||::|...|.||.:||.||||.|||.|| :.|...:|:  
Zfish   169 IFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFRATLPWTTCNNRWNTPNC-THYLSTDLN-- 230

  Fly   200 DKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQI--SHGIEEIGNIRWELAGTLLLVWIL 262
               ::.|...:              .|.:||:.|:.||:  |.|:.::|.:.|:||..||.::.:
Zfish   231 ---VSWTNNSI--------------SPAEEFYVRQVLQVHLSPGLHQLGWVSWQLALCLLFIFTV 278

  Fly   263 CYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAV 327
            .||.||||||.:||||:.||.|||::|.|||:||.|||||..|:.||:.|::.||..:.||:||.
Zfish   279 VYFSIWKGVKTSGKVVWVTATFPYLVLLILLIRGATLPGAWRGVVFYLKPDWKKLLTTTVWLDAA 343

  Fly   328 TQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMAHEQQRPVA 392
            .|||||.|.|.|.|:|..|||.|.||.||||||..:||..||..:|||||:|:|:||..:|:.|.
Zfish   344 AQIFFSLGPGFGVLLAFASYNPFHNNCYKDALITSSVNCLTSFLSGFVIFTVLGYMAEMRQQGVE 408

  Fly   393 DVAA-SGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRK 456
            .||. :||.|.|::|..|:..:|.:..::.:||.|::::||||.|..:||.|||::||:|.||.:
Zfish   409 TVAKDAGPSLLFIIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPHLLAR 473

  Fly   457 RKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDG 521
            |:|.|:..:..:.||..|:.:|.||.::.::.:.|| :|..::.::|.|.:::||.||..||.:.
Zfish   474 RREWFVLGLVCVCYLGALSTLTYGGAFVVKLFEEYA-TGPAVITVVFLEVIAVSWFYGTTRFCND 537

  Fly   522 IKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQW----TPVKYLDYSYPWWAHAFGWFTALSS 582
            ::.|:|:.|.::|:.||.    |||.....|.||.:    ..||..||.||:|....|:...:||
Zfish   538 VQLMLGFAPGLFWRVCWI----AICPCFLLFIIVSFLAFPPEVKLFDYLYPFWTTVLGYCIGVSS 598

  Fly   583 MLYIPLYMFWLWKRTPGELSEKI 605
            .:.:|.||.:....|.|...:::
Zfish   599 FICVPSYMVYHLVTTKGTFQQRL 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 239/556 (43%)
slc6a4aNP_001035061.1 SLC5-6-like_sbd 91..628 CDD:444915 239/556 (43%)

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