DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gat and SLC6A9

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_964012.2 Gene:SLC6A9 / 6536 HGNCID:11056 Length:706 Species:Homo sapiens


Alignment Length:593 Identity:253/593 - (42%)
Similarity:381/593 - (64%) Gaps:23/593 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 HTTSLQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGG 93
            |:.::..:....::.:.:.|.:|      ||:|.::::|:|:.||.|:|||||||||||||:|||
Human    77 HSLAMAQNGAVPSEATKRDQNLK------RGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGG 135

  Fly    94 GAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVIL 158
            |||:.||.|.|...|||:|||||:.||..:.|.|||::|:|:|||:||...|:|.::.:||.|::
Human   136 GAFMFPYFIMLIFCGIPLFFMELSFGQFASQGCLGVWRISPMFKGVGYGMMVVSTYIGIYYNVVI 200

  Fly   159 AWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNLHCWDKIINGTTQKV--CSVSALNITSL 221
            ..|.:|||.||...:||..|||.|||.:|....:..||      .||:....  .::|.|...||
Human   201 CIAFYYFFSSMTHVLPWAYCNNPWNTHDCAGVLDASNL------TNGSRPAALPSNLSHLLNHSL 259

  Fly   222 ELTDPVKEFWERRALQISHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPY 286
            :.|.|.:|:|....|::|..|...|.:|..|.|.|.:.|::.:.|:.:|||.:||||||||.|||
Human   260 QRTSPSEEYWRLYVLKLSDDIGNFGEVRLPLLGCLGVSWLVVFLCLIRGVKSSGKVVYFTATFPY 324

  Fly   287 VLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFT 351
            |:||||.|||:||.||.:||.:|:.|.:.|:..::||.||.:|||:|.|...|.|:.:.|||||.
Human   325 VVLTILFVRGVTLEGAFDGIMYYLTPQWDKILEAKVWGDAASQIFYSLGCAWGGLITMASYNKFH 389

  Fly   352 NNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGS 416
            ||.|:|::|:...|.:||::|||||||::||||:.....|:.||..||||||:.||.|:..||.|
Human   390 NNCYRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVSRVADHGPGLAFVAYPEALTLLPIS 454

  Fly   417 PMWSCLFFFMLLLIGLDSQFCTMEGFITAIID----EWPQLLRKRKEIFIAIVCALSYLVGLTCI 477
            |:||.||||||:|:||.:|||.:|..:|||:|    ||  :|:|:..:.:.:..| .:|:|:...
Human   455 PLWSLLFFFMLILLGLGTQFCLLETLVTAIVDEVGNEW--ILQKKTYVTLGVAVA-GFLLGIPLT 516

  Fly   478 TQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTT 542
            :|.|:|...::|:||.| |.|:.:....||:|.:.||...::..|:.|:|:.|.::::.||...:
Human   517 SQAGIYWLLLMDNYAAS-FSLVVISCIMCVAIMYIYGHRNYFQDIQMMLGFPPPLFFQICWRFVS 580

  Fly   543 PAICLGVFFFNIVQWTPVKYLDYSYPWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGE-LSEKIR 606
            |||...:..|.::|:.|:.|..|.||.||.|.|:..||||:|.||||..:...||.|: |.::::
Human   581 PAIIFFILVFTVIQYQPITYNHYQYPGWAVAIGFLMALSSVLCIPLYAMFRLCRTDGDTLLQRLK 645

  Fly   607 ALVRIDED 614
            ...:...|
Human   646 NATKPSRD 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 249/559 (45%)
SLC6A9NP_964012.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
SLC6sbd_GlyT1 84..667 CDD:212067 252/586 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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