DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gat and SLC6A3

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001035.1 Gene:SLC6A3 / 6531 HGNCID:11049 Length:620 Species:Homo sapiens


Alignment Length:578 Identity:257/578 - (44%)
Similarity:377/578 - (65%) Gaps:23/578 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 TTTDTSNKQQLVKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIIT 103
            ::|.|:.:|..|:.:   ||.:|..|:||:|||:|.|:.|.|||||||||||||||||::||::.
Human    44 SSTLTNPRQSPVEAQ---DRETWGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLF 105

  Fly   104 LFLAGIPMFFMELALGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMS 168
            :.:||:|:|:|||||||....|..||:||.||.||:|:...::|.::..:|.||:|||:.|.|.|
Human   106 MVIAGMPLFYMELALGQFNREGAAGVWKICPILKGVGFTVILISLYVGFFYNVIIAWALHYLFSS 170

  Fly   169 MRADVPWRTCNNWWNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWER 233
            ...::||..|||.||:.||      .:.|..|.  :|.:      |.||.|.  .|.|..|::||
Human   171 FTTELPWIHCNNSWNSPNC------SDAHPGDS--SGDS------SGLNDTF--GTTPAAEYFER 219

  Fly   234 RALQI--SHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRG 296
            ..|.:  ||||:::|..||:|...|:||.:|.||.:|||||.:||||:.||..|||:||.||:||
Human   220 GVLHLHQSHGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRG 284

  Fly   297 ITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIV 361
            :|||||::||:.|:..:|.:|..:.|||||.||:.||.|:|.|.|:|..||||||||.|:||::.
Human   285 VTLPGAIDGIRAYLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIVT 349

  Fly   362 CTVNSSTSMFAGFVIFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFM 426
            .::||.||..:|||:||.:|:||.:...|:.|||..||||.|::||.|:..||.|..|:.:||.|
Human   350 TSINSLTSFSSGFVVFSFLGYMAQKHSVPIGDVAKDGPGLIFIIYPEAIATLPLSSAWAVVFFIM 414

  Fly   427 LLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSY 491
            ||.:|:||....||..||.:|||: |||.:.:|:|...:...::|:.|.|:|.||:|:|.:||.:
Human   415 LLTLGIDSAMGGMESVITGLIDEF-QLLHRHRELFTLFIVLATFLLSLFCVTNGGIYVFTLLDHF 478

  Fly   492 AVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQ 556
            | :|..:|:.:..|.:.::|.|||.:|.|.|:.|.|..|:::|:.||.:.:|...|.|...:||.
Human   479 A-AGTSILFGVLIEAIGVAWFYGVGQFSDDIQQMTGQRPSLYWRLCWKLVSPCFLLFVVVVSIVT 542

  Fly   557 WTPVKYLDYSYPWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALVRIDED 614
            :.|..|..|.:|.||:|.||..|.|||..:|:|..:.:...||...||:...:..::|
Human   543 FRPPHYGAYIFPDWANALGWVIATSSMAMVPIYAAYKFCSLPGSFREKLAYAIAPEKD 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 251/554 (45%)
SLC6A3NP_001035.1 SLC6sbd_DAT1 60..614 CDD:212083 252/559 (45%)
Interaction with TGFB1I1. /evidence=ECO:0000269|PubMed:12177201 561..590 10/28 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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