DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and SLC6A1

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001335179.1 Gene:SLC6A1 / 6529 HGNCID:11042 Length:599 Species:Homo sapiens


Alignment Length:621 Identity:342/621 - (55%)
Similarity:446/621 - (71%) Gaps:46/621 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYTNSASDGDGGGDVCKHESIEMSKELGHTTSLQSSSPTTTDTSNKQQLVKIEQ----LPDRGSW 61
            |.||.:...||          ::|.|:       |.:|...| ..|..:||:::    ||||.:|
Human     1 MATNGSKVADG----------QISTEV-------SEAPVAND-KPKTLVVKVQKKAADLPDRDTW 47

  Fly    62 SSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGG 126
            ..:.||::|.||.||||||||||||||.|||||||::||.:||..||:|:|.:|.:|||..:|||
Human    48 KGRFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGG 112

  Fly   127 LGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQY 191
            |||:|:||:|||:|.||||:|.|:|:|||||::||::|.:.|....:||:.|:|.|||..|.|.|
Human   113 LGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNTDRCFSNY 177

  Fly   192 ERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQISHGIEEIGNIRWELAGTL 256
                                  |.:|.|:  :|..|.|||||...|::.|:::.|.|||.||.||
Human   178 ----------------------SMVNTTN--MTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITL 218

  Fly   257 LLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSE 321
            .:.|||.||||||||.||||||||:|.:||::|.||..||:|||||.|||.|||.|||.||::||
Human   219 AIAWILVYFCIWKGVGWTGKVVYFSATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSE 283

  Fly   322 VWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMAHE 386
            ||:||.||||||||||||:|:||||||.|.||||:|::|||.:||.|||||||||||::|||||.
Human   284 VWLDAATQIFFSYGLGLGSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHV 348

  Fly   387 QQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWP 451
            .:|.:|||||||||||||.||.||.|||.||:|:.|||.|||::|:||||||:||||||::||:|
Human   349 TKRSIADVAASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYP 413

  Fly   452 QLLRKRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVD 516
            :|||.|:|:|||.||.:|||:||:.|||||:|:|::.|.|:.||..||:|:|||||||||.|||:
Human   414 RLLRNRRELFIAAVCIISYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVN 478

  Fly   517 RFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDYSYPWWAHAFGWFTALS 581
            ||||.|::|:|..|.:|||.||...||.|..|||.|:.||.||:...:|.:|.|....||..|||
Human   479 RFYDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGNYVFPKWGQGVGWLMALS 543

  Fly   582 SMLYIPLYMFWLWKRTPGELSEKIRALVRIDEDVTR 617
            ||:.||.||.:::....|.|.::|:.:|:..||:.|
Human   544 SMVLIPGYMAYMFLTLKGSLKQRIQVMVQPSEDIVR 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 323/552 (59%)
SLC6A1NP_001335179.1 SLC6sbd_GAT1 2..599 CDD:212075 341/620 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599 1/3 (33%)
PDZ-binding 597..599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 698 1.000 Domainoid score I128
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2290
Inparanoid 1 1.050 722 1.000 Inparanoid score I630
Isobase 1 0.950 - 0 Normalized mean entropy S2610
OMA 1 1.010 - - QHG49243
OrthoDB 1 1.010 - - D145627at33208
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 1 1.000 - - oto90487
orthoMCL 1 0.900 - - OOG6_100347
Panther 1 1.100 - - LDO PTHR11616
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3258
SonicParanoid 1 1.000 - - X3352
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.820

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