DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gat and si:ch211-283g2.1

DIOPT Version :9

Sequence 1:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_017211707.1 Gene:si:ch211-283g2.1 / 569007 ZFINID:ZDB-GENE-060531-57 Length:581 Species:Danio rerio


Alignment Length:569 Identity:257/569 - (45%)
Similarity:372/569 - (65%) Gaps:44/569 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQML 122
            |.:||.:::|.|:.:|.|:||||:||||||||::|||||:|||::.|.:.|||:..|||.|||.|
Zfish     9 RPTWSRQIEFTLAGIGCAVGLGNIWRFPYLCYRSGGGAFLLPYLLMLVVLGIPLLHMELTLGQYL 73

  Fly   123 TIGG-LGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVN 186
            ..|. |.:.|..|:|||:|.|...:|..|..||.:|:.||::|.|.|.|:::.|:.|||.|||||
Zfish    74 RRGPVLALAKACPLFKGVGMATVAISFIMCTYYNIIITWALYYMFSSFRSELLWQNCNNTWNTVN 138

  Fly   187 CVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTDPVKEFWERRALQISHGIEEIGNIRWE 251
            |.           |::.|.::....|               ::|:..:.|:.:.|:||.|.:|||
Zfish   139 CT-----------DQVTNSSSSSTAS---------------QQFFNYKVLERTSGVEETGTLRWE 177

  Fly   252 LAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSK 316
            |...|||.|||.|.||:||||.||||||||||||||:|..||:..:.|||||:||||:|||.:.|
Zfish   178 LFLLLLLAWILVYLCIFKGVKSTGKVVYFTALFPYVILLALLINNVQLPGALDGIKFFIIPEWDK 242

  Fly   317 LTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIG 381
            |.|.:|||:|..|||.|.|:|.|:|:|:.|||.:.|||.||.|.:...||.||:||||||||..|
Zfish   243 LLNVQVWINAAAQIFNSIGIGFGSLMAMASYNNYNNNVLKDTLAIAITNSLTSIFAGFVIFSAFG 307

  Fly   382 FMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAI 446
            :|:|.|..||:::|..||||..:|||.|.:.:|.:|:|:.|||||||.:||||||..:|..:|::
Zfish   308 YMSHLQNVPVSEIAVDGPGLVLVVYPQAFVTMPVAPLWAFLFFFMLLCLGLDSQFAMVEVMVTSL 372

  Fly   447 IDEWPQ-LLR--KRKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYA--VSGFCLLWLIFFEC 506
            :|.:.: :|:  ||||..:.:||..::|:|:..:.|.|:|:||::|.|.  ||   :::|.|||.
Zfish   373 LDSYSKPILKHLKRKEFLVLLVCGAAFLLGIPNVMQVGIYVFQLMDHYTAIVS---IMFLAFFEV 434

  Fly   507 VSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDYSYPWWA 571
            |.:.|||||.|....:.:|.|..|:::::.||.|..||:...:..|:::|:.|.:|.||.||.||
Zfish   435 VGVCWCYGVKRLSSNLVEMTGKRPSIFFRICWWVICPALITVILVFSVIQFKPARYEDYVYPPWA 499

  Fly   572 HAFGWFTALSSMLYIPL---YMFWLWKRTPGELSEKIRALV---RIDED 614
            ...||..||:|:::|||   :..|:   .||..:||.:..:   .:|||
Zfish   500 QGVGWLIALASIIWIPLAAVHTLWV---LPGSFTEKFKKSITPFSLDED 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 254/564 (45%)
si:ch211-283g2.1XP_017211707.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49243
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.930

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